Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_B24
(532 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 143 2e-35
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 40 2e-04
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 36 0.005
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.015
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 32 0.061
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 30 0.25
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 30 0.25
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 1.3
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 27 1.3
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 27 1.7
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 27 2.3
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 26 3.0
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 4.0
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 143 bits (346), Expect = 2e-35
Identities = 69/119 (57%), Positives = 88/119 (73%), Gaps = 6/119 (5%)
Frame = +3
Query: 6 RQIPYTMMKFACFERTVELLYKYVVPKPREQCSKSEQLVVTFAAGYIAGVFCAIVSHPAD 185
RQIPYTMMKFA FER VE LY Y+ KP+ SK+E++ ++FA GY+AGV CAI+SHPAD
Sbjct: 185 RQIPYTMMKFASFERIVEALYTYI-GKPKNMYSKAEKIGISFAGGYMAGVLCAIISHPAD 243
Query: 186 TVVSKLNQDKTATVGS------IIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVKV 344
+VSKLN +K A G+ I ++G++G+W GLG RIVMIGTLT QW IYD+ K+
Sbjct: 244 VMVSKLNSNKKAGEGAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDSFKI 302
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 39.9 bits (89), Expect = 2e-04
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Frame = +3
Query: 6 RQIPYTMMKFACFERTVELLYKYVVPKPREQCSKSEQLVVTFAAGYIAGVFCAIVSHPAD 185
R+IP+T+++F +E L K+ + R + E + +G IAG A ++ P D
Sbjct: 228 REIPFTLIQFPIWEH---LKLKWRIKHSRNKNLAHEAAI----SGSIAGGIAAALTTPFD 280
Query: 186 TVVSKL--NQDKTA---TVGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAV 338
V +++ +Q + + T+ SI+ G+ ++KG+ PR++ + A+ YD +
Sbjct: 281 VVKTRIMTSQQRLSYVFTIKSIVAHEGFLALYKGIVPRVLWLSGGGAIFLGCYDVI 336
Score = 27.1 bits (57), Expect = 1.7
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +3
Query: 135 AGYIAGVFCAIVSHPADTVVSKLNQDKTATVGSIIGKLGWAGVWKGLGPRIVMIGTLTAL 314
AG AG+ + P DT+ ++L Q K G + G+ GV++GLG +V +L
Sbjct: 88 AGICAGLAVDLSLFPIDTLKTRL-QAK----GGFVKNGGFHGVYRGLGSILVGSAPGASL 142
Query: 315 QWFIYDAVK 341
+ Y+ +K
Sbjct: 143 FFTTYENMK 151
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 35.5 bits (78), Expect = 0.005
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 5/117 (4%)
Frame = +3
Query: 6 RQIPYTMMKFACFERTVELLYKYVVPKPREQCSKSEQLVVTFAAGYIAGVFCAIVSHPAD 185
R +P++ + +ER L + + ++ L + F +G I+G +++ P D
Sbjct: 209 RDVPFSAFYWWSYERIRLFLLGHPSLQAFSSSQSTKDLYINFVSGGISGTLATLLTQPFD 268
Query: 186 -TVVSKLNQDKTATVGSIIGKL----GWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 341
+ +K T T G + L G +WKG PR V + A+ Y K
Sbjct: 269 VSKTAKQVHGHTLTRGQFMLTLWKRGGPKALWKGTLPRCVKVAPSCAIMISSYHLTK 325
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.015
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 249 GWAGVWKGLGPRIVMIGTLTALQWFIYDAVKVWL 350
G+ G++KGL P ++ + A+ + +Y+ K WL
Sbjct: 390 GFRGLYKGLSPNLLKVAPSVAISYLVYENCKKWL 423
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 31.9 bits (69), Expect = 0.061
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +3
Query: 123 VTFAAGYIAGVFCAIVSHPADTVVSKL-NQDKT----ATVGSIIGKLGWAGVWKGLGPRI 287
V F G AG+F + S+P DT+ +K + KT I + G G + GL +
Sbjct: 106 VNFLCGTSAGIFATLTSYPLDTMRTKFASYAKTPHMLPATKKIYAEAGIKGFFPGLKFSV 165
Query: 288 VMIGTLTALQWFIYDA 335
+ IG + Y A
Sbjct: 166 IQIGPYAGCFFMFYRA 181
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 29.9 bits (64), Expect = 0.25
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Frame = +3
Query: 123 VTFAAGYIAGVFCAIVSHPADTVVSKL-----NQDKTAT---VGSIIGKLGWAGVWKGLG 278
VTFAAG +AG+ + +P D V +++ D T + I+ G +++G+
Sbjct: 10 VTFAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGIL 69
Query: 279 PRIVMIGTLTALQWFIYDAV-KVW 347
P I+M AL++ D K+W
Sbjct: 70 PPILMEAPKRALKFASNDTYSKLW 93
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 29.9 bits (64), Expect = 0.25
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Frame = +3
Query: 120 VVTFAAGYIAGVFCAIVSHPADTVVSKLN--------QDKTATVGSIIGKLGWAGVWKGL 275
V TF G +AG+ + P DTV S++ ++ I+ + G W G
Sbjct: 204 VTTFLVGSVAGIITVYCTQPIDTVKSRMQSLSASKEYKNSIHCAYKILTQDGLLRFWSGA 263
Query: 276 GPRIVMIGTLTALQWFIYDAV 338
PR+ + + + +Y+ V
Sbjct: 264 TPRLARLILSGGIVFTVYEKV 284
Score = 25.0 bits (52), Expect = 7.0
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 78 VPKPREQCSKSEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQDKTATVGSIIGKLGWA 257
V K + S V + AG +AG +++PA+ ++L + V KL
Sbjct: 4 VAKTNPKSSNKPGPVKSIIAGGVAGAIEISITYPAEFAKTRLQLYR--NVEGTKAKLPPF 61
Query: 258 GV--WKGLGPRIVMIGTLTALQWFIYDAVK 341
G+ ++G IV A+++F +D++K
Sbjct: 62 GLEWYRGCSTVIVGNSLKAAVRFFAFDSIK 91
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 225 VGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAV 338
+G + G G+++G GPRI + ++L + Y+ +
Sbjct: 288 LGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYEGI 325
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 249 GWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 341
G +KG+ PR+V+ TA+ W Y+A K
Sbjct: 261 GIPSFFKGIRPRMVVAMPATAVSWAAYEAGK 291
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 129 FAAGYIAGVFCAIVSHPADTVVSKLNQD 212
F AG +AG+ AI + P D V ++L D
Sbjct: 52 FIAGGVAGMLGAIATAPLDVVKTRLQSD 79
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 249 GWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 341
G G+++G GP +V I L + +YD +K
Sbjct: 190 GLRGLYRGFGPSVVGIVVYRGLYFGMYDTLK 220
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 313 SAVRVPIITILGPRPFQTPAQPSLPIIDPTVAV 215
+A P+I + P T PSLP++D V
Sbjct: 169 AAKAAPVIHVYEPDAIVTTTDPSLPLLDSNAVV 201
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 4.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 57 ELLYKYVVPKPREQCSKSEQLVVTFA 134
E LYK V PKPR+Q +++ V FA
Sbjct: 468 EFLYK-VKPKPRQQFDAADKFDVPFA 492
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,894,606
Number of Sequences: 5004
Number of extensions: 32757
Number of successful extensions: 144
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 218398248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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