Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_B23
         (141 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    18   9.5  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    18   9.5  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    18   9.5  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    18   9.5  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    18   9.5  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    18   9.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    18   9.5  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    18   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    18   9.5  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 109 YQNNNFFLNTY 141
           Y NNN+  N Y
Sbjct: 97  YNNNNYNNNNY 107


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 109 YQNNNFFLNTY 141
           Y NNN+  N Y
Sbjct: 97  YNNNNYNNNNY 107


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 109 YQNNNFFLNTY 141
           Y NNN+  N Y
Sbjct: 97  YNNNNYNNNNY 107


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 109 YQNNNFFLNTY 141
           Y NNN+  N Y
Sbjct: 97  YNNNNYNNNNY 107


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 109 YQNNNFFLNTY 141
           Y NNN+  N Y
Sbjct: 98  YNNNNYNNNNY 108


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 109 YQNNNFFLNTY 141
           Y NNN+  N Y
Sbjct: 98  YNNNNYNNNNY 108


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein
          protein.
          Length = 471

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +2

Query: 2  HEASNYLFIYNHLL 43
          +    Y+F Y HLL
Sbjct: 41 NRTGRYMFTYLHLL 54


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 109 YQNNNFFLNTY 141
           Y NNN+  N Y
Sbjct: 333 YNNNNYNNNNY 343


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 29  YNHLLILEFFLPIH 70
           YN +L++E   P H
Sbjct: 666 YNSILMIEHLSPDH 679


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,068
Number of Sequences: 438
Number of extensions: 592
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 27
effective length of database: 134,517
effective search space used:  2555823
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)