Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_B18
         (436 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p...    27   4.4  
AL033514-7|CAA22114.1|  648|Caenorhabditis elegans Hypothetical ...    27   4.4  
AL110471-2|CAB63306.1|  479|Caenorhabditis elegans Hypothetical ...    27   5.9  
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AF125461-2|AAK18994.1|  158|Caenorhabditis elegans Hypothetical ...    27   7.8  
AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
           protein T05F1.6 protein.
          Length = 1165

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
 Frame = +2

Query: 311 NVQKYKDGSDESTSDSDVELLDNKVES-EPEAPR-----ALSLSDDDD 436
           + +K ++  ++   D D E +D+  E  E EAP+     A+S SDDDD
Sbjct: 149 DTEKPEENEEKVVGDEDEEDIDDVQEDDEDEAPKKKTKKAVSTSDDDD 196


>AL033514-7|CAA22114.1|  648|Caenorhabditis elegans Hypothetical
           protein Y75B8A.7 protein.
          Length = 648

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 326 KDGSDESTSDSDVELLDNKVESEPEAPRALSLSDDDD 436
           +DGSD S   S+ EL D++ E E E      + D+D+
Sbjct: 109 EDGSDGSDGGSEEELDDDEEELEDEELEDEMIDDEDE 145


>AL110471-2|CAB63306.1|  479|Caenorhabditis elegans Hypothetical
           protein T06D10.2 protein.
          Length = 479

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +2

Query: 329 DGSDESTSDSDVELLDNKVESEPEAPRALSLSDDDD 436
           +G ++STSD+D+   D K E +   P+ +++  DDD
Sbjct: 389 EGDEDSTSDNDI-AGDKKKEKQ---PKRITIDSDDD 420


>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
            K12D12.1 protein.
          Length = 1520

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +2

Query: 251  ELMEVSPAPREKPGARRAVANVQKYKDGSDESTSDSDVELLDNKVESEPEAPR 409
            +L +    P +KP   +  A  +K  + SD S  DSD E       S+  +P+
Sbjct: 1387 DLSDDDEVPAKKPAPAKKAAPKKKKSEFSDLSGGDSDEEAEKKPSTSKKPSPK 1439


>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
            K12D12.1 protein.
          Length = 1520

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +2

Query: 251  ELMEVSPAPREKPGARRAVANVQKYKDGSDESTSDSDVELLDNKVESEPEAPR 409
            +L +    P +KP   +  A  +K  + SD S  DSD E       S+  +P+
Sbjct: 1387 DLSDDDEVPAKKPAPAKKAAPKKKKSEFSDLSGGDSDEEAEKKPSTSKKPSPK 1439


>AF125461-2|AAK18994.1|  158|Caenorhabditis elegans Hypothetical
           protein Y8A9A.3 protein.
          Length = 158

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 323 YKDGSDESTSDSDVELLDNKVESEPEAPRALSLSDDDD 436
           YK    E     +VEL D+ VESE E+    S  D +D
Sbjct: 9   YKADEKEEEKAEEVELDDSDVESEEESEDEESDEDPED 46


>AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical
           protein Y48G1A.4 protein.
          Length = 813

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 314 VQKYKDGSDESTSDSDVELLDNKVESEPEAPRALSLSDDDD 436
           ++K  DGSDES  D D+E  +  ++   E    L    DD+
Sbjct: 319 LKKNLDGSDESDDDEDLEDEEEDLDDLLEDEDELEEDSDDE 359


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,357,090
Number of Sequences: 27780
Number of extensions: 96780
Number of successful extensions: 758
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)