Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_B16
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.19 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   3.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   9.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 16/69 (23%), Positives = 21/69 (30%)
 Frame = +2

Query: 5   EAGTGGRVSPPALASRTDAATPRTSTSDSPAPTRASHXXXXXXXXXXXXXXXXXXXXPCS 184
           E   GG     + A  TDA+TP T T+     T  +                        
Sbjct: 195 EFANGGAARDESKAGSTDASTPATVTTTGATTTLPAASATGTGPATPSAVVATSNATAAM 254

Query: 185 TARTSPAPT 211
           T  T+  PT
Sbjct: 255 TTGTTTIPT 263


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 75  VRGVAASVLDASAGGDTRPPVPA 7
           V+ + A ++  SAG D  PP+ A
Sbjct: 313 VQAMIAGIVVISAGADAYPPLAA 335


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 35  PALASRTDAATPRTSTSDSPAPTRAS 112
           PA + R  +A   +STS SP P  ++
Sbjct: 823 PASSPRYLSAAATSSTSTSPRPASST 848



 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 59  AATPRTSTSDSPAPTRAS 112
           AAT  TSTS  PA + A+
Sbjct: 833 AATSSTSTSPRPASSTAA 850


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 53  FSTPAPVATPAPRSPPR 3
           +++ A  ATP   SPPR
Sbjct: 384 YASGAQFATPCTPSPPR 400


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 7   GGDRGAGVATGAGVENG 57
           G D  A +  GAG E+G
Sbjct: 466 GSDGNANIEIGAGEEDG 482


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.305    0.123    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,196
Number of Sequences: 438
Number of extensions: 1131
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.1 bits)