Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_B15
(532 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1235.04c |||FAD synthetase|Schizosaccharomyces pombe|chr 3||... 31 0.11
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 31 0.14
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 30 0.25
SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual 29 0.43
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 28 0.76
SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces pom... 28 0.76
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 28 1.00
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 27 1.7
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 27 1.7
SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces ... 27 2.3
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 26 3.0
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 26 3.0
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 4.0
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 26 4.0
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 5.3
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 25 5.3
SPBC530.01 |gyp1||GTPase activating protein Gyp1 |Schizosaccharo... 25 7.0
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 25 7.0
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 25 7.0
SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.0
SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces ... 25 7.0
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 25 9.3
SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 25 9.3
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 9.3
SPAC11D3.06 |||MatE family transporter|Schizosaccharomyces pombe... 25 9.3
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 25 9.3
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 25 9.3
>SPCC1235.04c |||FAD synthetase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 265
Score = 31.1 bits (67), Expect = 0.11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 390 EMSTEFCKLFDRGRTVCGGVS 328
E +T++C L+DRG T GGVS
Sbjct: 186 ETNTKYCSLYDRGYTSLGGVS 206
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 30.7 bits (66), Expect = 0.14
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 116 DQMRDIEAAHFANAAGPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYR 295
++M E ++ + A P + + +R+ ++ YNSHR +R K D++ Y
Sbjct: 65 EEMEQAETSYAYDTAAHDDPVQRQLEEDERCARELAN--RYNSHRPERRRKTNNDRRNYP 122
Query: 296 PVRR 307
P R
Sbjct: 123 PQNR 126
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 29.9 bits (64), Expect = 0.25
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Frame = +2
Query: 212 RQTSSIDTYNSHRKIKRPKLIGDKK---VYRPVRRHT-LSRIDE-TPPQTVRPRSKSLQN 376
+Q S + T + + P +G + V P +R + + R D T RP++ S +
Sbjct: 37 KQVSPVSTARTSIARRPPSTVGSQTGSLVNAPPKRSSGIERFDHVTGTAENRPQTPSTKA 96
Query: 377 SVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQPEHGSPQYAEPKDS 529
SV S N + +S+S V + E V+ PE Q A P D+
Sbjct: 97 SVANVKPAGAAESAQNANLISSKSENVPEPAGEKVSMPEKQDLQSALPSDA 147
>SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 29.1 bits (62), Expect = 0.43
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +2
Query: 335 PPQTVRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQPEHGSPQ 508
PP + RP++ N + + + I S +N A S P N + P + PQ
Sbjct: 45 PPPSTRPQTDGNSNQIPMENVGHISLSSANSHAYAPPSGPPPNTGANSYGNPNYSGPQ 102
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.3 bits (60), Expect = 0.76
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 270 LSAIRKCTGR*GDIPCLESTRRLRRRSGPDQRACRTRLTSRP 395
+S+ R CT R +PCL+ + PDQ T T+ P
Sbjct: 526 ISSSRDCTIRLWSLPCLDDPPFVNVNENPDQNNDFTSATTNP 567
>SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 605
Score = 28.3 bits (60), Expect = 0.76
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 208 LPANLLHRHVQLPPEDQKTETY 273
L NLL R+V LPP+ ++T TY
Sbjct: 68 LMLNLLRRYVGLPPKSKETGTY 89
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 27.9 bits (59), Expect = 1.00
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 296 PVRRHTLSRIDETPPQTVRPRSKSLQNSVDISSTRPILRSRS 421
P+ RHT ++ T V+P S + + +S +P L + S
Sbjct: 340 PIPRHTKPKLSTTQSTPVKPASLQSEEDIQLSFKQPELSASS 381
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 344 TVRPRSKSLQ-NSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQP 490
T R + KSL+ ++ + S+ +++SN++ S P+C + ET+ P
Sbjct: 496 TKRKKQKSLKPDTENQESSVKNKKAKSNVNLQYSPKTPICKINDETLKPP 545
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 380 VDISSTRPILRSRSNISADTSRSV 451
+D+SST+ +LRS S I DT R++
Sbjct: 848 LDLSSTKSLLRSLSLIEDDTVRNI 871
>SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 761
Score = 26.6 bits (56), Expect = 2.3
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +2
Query: 137 AAHFANAAGPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTL 316
+A+ +N+ + N PP +Q LS SSI T N+ + + L+ R
Sbjct: 128 SAYNSNSFEGTGSSPNFPPQNQFLSDSRSSIATLNAIPSLDQSVLLNPNLRARTPSLVPE 187
Query: 317 SRIDETPPQTVRPRSKSLQNSVDISS 394
D+T ++V +S S NS+ +S
Sbjct: 188 HYFDDT-DKSVHSKSSSGSNSLSEAS 212
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 26.2 bits (55), Expect = 3.0
Identities = 18/73 (24%), Positives = 28/73 (38%)
Frame = +2
Query: 158 AGPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETP 337
A P + A N P +R+TSS +SH + P+ R + P
Sbjct: 558 ATPLSSAPNPPSVMPTYARKTSSHSERSSHSSYHNSSHVPTAAFNSPIMRTSTKSTSPIP 617
Query: 338 PQTVRPRSKSLQN 376
+ +S SLQ+
Sbjct: 618 ARPFYAQSGSLQS 630
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/66 (22%), Positives = 28/66 (42%)
Frame = +2
Query: 335 PPQTVRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQPEHGSPQYA 514
P T P + + Q ++ +T ++S + + P + SHE +P+ G
Sbjct: 63 PRLTAAPNTHAQQANLQSGNTSITHETQSTSRGQEATTSPSLSASHEKPARPQTGEGSDN 122
Query: 515 EPKDSD 532
E +D D
Sbjct: 123 EDEDED 128
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.8 bits (54), Expect = 4.0
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +2
Query: 230 DTYNSHRKIK---RPKLIGDKKVYRPVRRHTLSRIDETPPQTVRPRSKSLQNSVDISSTR 400
D N +I+ RP +I + ++YR + R+ + R R + + VDI R
Sbjct: 810 DAKNEEHRIRDNQRP-VIEEIRIYREKIQTETQRLSSLQTELSRLRDEKRNSEVDIERHR 868
Query: 401 PILRSRSNISADTSRSVPVCNQ 466
+ S +NI + C Q
Sbjct: 869 QTVESCTNILREKEAKKVQCAQ 890
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 307 SPYRPVHFLIADKFRSFDLPVGVVR 233
S Y+P+++ D SFD+P V R
Sbjct: 515 SKYKPINYPKPDNVLSFDIPTSVSR 539
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 25.4 bits (53), Expect = 5.3
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 1/120 (0%)
Frame = +2
Query: 173 PARNNPPTSQHLSRQTSSIDTYNSHRKIKRPK-LIGDKKVYRPVRRHTLSRIDETPPQTV 349
PA PP S+ ++T S + K + GD K L++ P++
Sbjct: 34 PATTTPPISRGNEDADEGLNTARSFSSFQDLKGMSGDAKEQESATLVHLTK-GRAHPRSR 92
Query: 350 RPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQPEHGSPQYAEPKDS 529
RP Q S+D + + S +ADT SV + P + S +P +S
Sbjct: 93 RPPR---QISIDSAKKEETKNTGSTKAADTKSSVEATISPLKDTKSPSNASVFPIKPTES 149
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 149 QSAPPLYPSSGRMLSSCKVRTGT 81
QS+P L P+SGR L+S R T
Sbjct: 342 QSSPYLVPNSGRTLNSENAREST 364
>SPBC530.01 |gyp1||GTPase activating protein Gyp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.0 bits (52), Expect = 7.0
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = +2
Query: 248 RKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQTVRPRSKSLQNSVD------ISSTRPIL 409
R I RP+ + K+Y P R +LS + +K L + D I +++ +
Sbjct: 72 RSITRPESASESKIYAPSARSSLSLEAVVGKKVSAKFAKYLSQTDDDWGVSNIKASKSLP 131
Query: 410 R-SRSNISADTSRSV-PVCNQSHETVNQPEHGSPQYAEP 520
R +RS +SRS+ P T Q H S ++ P
Sbjct: 132 RMARSTTPNSSSRSLFPQNGVDTTTSRQKLHSSGRFPLP 170
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.0 bits (52), Expect = 7.0
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -2
Query: 429 DMFDLDRNIGRVDEMSTEFCKL 364
D+ ++ RNIG + ++ T C+L
Sbjct: 132 DLEEISRNIGDIQQLETNQCRL 153
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 25.0 bits (52), Expect = 7.0
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +2
Query: 140 AHFANAAGPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLS 319
+H+++++GP P ++ +++ ++ S K P+ P ++ L+
Sbjct: 27 SHYSDSSGPSKPVSPFFKKERYKHHLETNVSSHQSATKFIEPE-------PSPTKKTKLT 79
Query: 320 RIDETPPQTVRPRSKSLQNSV---DISSTRPILRS 415
R D T P R R KSL V ++ R I+R+
Sbjct: 80 RRD-TRPLAERARPKSLDEYVGQEELVGERGIIRN 113
>SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 253
Score = 25.0 bits (52), Expect = 7.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 331 LVDSRQGMSPYRPVHFLIADKFRSF 257
++D+ +G SPY V L K RSF
Sbjct: 158 VIDASRGYSPYTSVDSLSVSKNRSF 182
>SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 25.0 bits (52), Expect = 7.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 365 SLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQ 487
+L+N I++T+P+L S IS+ TS + V E V Q
Sbjct: 145 ALENGTVITATKPLLISHHRISSITSTAKWVLVIEKEAVFQ 185
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 24.6 bits (51), Expect = 9.3
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 164 PQAPARNNPPTSQHLSRQTSSIDTYN--SHRKIKRPKLIGDKKVYRPVRRHTLSRIDET 334
P AP R PPT Q S + +D+ +++ IK+P D + P+ R+DE+
Sbjct: 359 PSAPTRPTPPTVQ-TSSSAAPVDSAEPVAYQPIKKPI---DPMLGYPLNVAATYRLDES 413
>SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory
subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 545
Score = 24.6 bits (51), Expect = 9.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 414 PGRTYRQTRVGACPFATRATKR*TSPNMVV 503
P T+R T +G CPF R ++ +V
Sbjct: 309 PWPTFRATSIGRCPFVPETKYRLSTSKSLV 338
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 24.6 bits (51), Expect = 9.3
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Frame = +2
Query: 401 PILRSR-SNIS---ADTSRSVPVCNQSHETVNQPEHGSP 505
PIL S SNI +DT ++PV + ++E +++ +G+P
Sbjct: 97 PILNSATSNIRLTPSDTYNNIPVSDTNNEEISKNIYGAP 135
>SPAC11D3.06 |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 9.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 422 STWTVISVAWTRCQPSSASSLIGAGPSAEASRRFETGYVAL 300
ST +I++ T + S+L GAG E +TG++ L
Sbjct: 56 STGWLIALGGTTAFDTLGSNLWGAGKKQELGILLQTGFIVL 96
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 24.6 bits (51), Expect = 9.3
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 161 GPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPP 340
GP P P S+ LSR TSS + +K+K + + V+ +D+ P
Sbjct: 570 GPLLPRPTTRPVSRGLSRGTSS----SLQQKVKASTPLNSGALNETVQNLKNMELDDPAP 625
Query: 341 QTVR 352
Q +
Sbjct: 626 QPAK 629
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 24.6 bits (51), Expect = 9.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 403 DITVQVEHIGRHESERARLQPEP 471
D VQ +HI R E+ RLQ +P
Sbjct: 157 DSDVQSQHITRDEAVNQRLQDDP 179
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,990,641
Number of Sequences: 5004
Number of extensions: 38347
Number of successful extensions: 177
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 218398248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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