Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_B15
(532 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 32 0.22
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 32 0.22
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 32 0.22
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 26 0.67
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 30 1.2
AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm (myotubu... 29 2.1
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 29 2.7
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 29 2.7
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 28 3.6
AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical... 28 3.6
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 28 3.6
U53339-1|AAA96197.3| 199|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 28 4.8
AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 28 4.8
AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical ... 28 4.8
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 28 4.8
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 27 6.3
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 27 6.3
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 27 6.3
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 27 6.3
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 27 6.3
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 27 8.4
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 27 8.4
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 27 8.4
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 27 8.4
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 188 PPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQTVRPRSKS 367
P + LSR + +R + GD P TL + DETP PRS+S
Sbjct: 2351 PRKGRSLSRDAERLLEIQPRAPPRRSRQSGDTLSPEPTPVLTLVKSDETPAPVRPPRSRS 2410
Query: 368 LQNSVDISSTRP 403
+ +++ T P
Sbjct: 2411 RHSGDELAETSP 2422
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 188 PPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQTVRPRSKS 367
P + LSR + +R + GD P TL + DETP PRS+S
Sbjct: 2351 PRKGRSLSRDAERLLEIQPRAPPRRSRQSGDTLSPEPTPVLTLVKSDETPAPVRPPRSRS 2410
Query: 368 LQNSVDISSTRP 403
+ +++ T P
Sbjct: 2411 RHSGDELAETSP 2422
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 188 PPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQTVRPRSKS 367
P + LSR + +R + GD P TL + DETP PRS+S
Sbjct: 2351 PRKGRSLSRDAERLLEIQPRAPPRRSRQSGDTLSPEPTPVLTLVKSDETPAPVRPPRSRS 2410
Query: 368 LQNSVDISSTRP 403
+ +++ T P
Sbjct: 2411 RHSGDELAETSP 2422
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 25.8 bits (54), Expect(2) = 0.67
Identities = 18/86 (20%), Positives = 35/86 (40%)
Frame = +1
Query: 238 QLPPEDQKTETYRR*ESVPAGKATYPVSNRRDASADGPAPIKELAELG*HLVHATDITVQ 417
QL E + T+T + VP ++ PV + P P + + E +V + ++
Sbjct: 509 QLSAETRPTQTEKPIAPVPPPISSIPVRKEMETQTKTPPPDQTVVE---KIVEIAPVEIK 565
Query: 418 VEHIGRHESERARLQPEPRNGEPART 495
+ E AR+ P+ + +T
Sbjct: 566 EDDSKGPEITEARISRIPKRSDSIKT 591
Score = 23.4 bits (48), Expect(2) = 0.67
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 199 PTPLPANLLHRHVQLPPEDQK 261
PTP P L + +LPP+ +K
Sbjct: 451 PTPPPLRKLEQCTELPPKPRK 471
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.9 bits (64), Expect = 1.2
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Frame = +2
Query: 137 AAHFANAAGPQAP-ARNNPPT---SQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVR 304
A+H N+ P +++N T S + S ++SS + SH + + + K P+
Sbjct: 67 ASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSS-QNHESHDRSRSFVQYDENKPLTPIS 125
Query: 305 RHTLSRIDETPPQTVRPR--SKSL-QNSVDISSTRPILRSRSNISADTSRSVPVCNQSHE 475
+ D +R R KSL QN+ D S TR SAD +S V E
Sbjct: 126 KKLAESTDLRSKAQLRERLLRKSLKQNAEDSSPTRAASGGGWGSSADVKKSPEVSTGLFE 185
Query: 476 TVNQP 490
T P
Sbjct: 186 TALSP 190
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.9 bits (64), Expect = 1.2
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Frame = +2
Query: 137 AAHFANAAGPQAP-ARNNPPT---SQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVR 304
A+H N+ P +++N T S + S ++SS + SH + + + K P+
Sbjct: 67 ASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSS-QNHESHDRSRSFVQYDENKPLTPIS 125
Query: 305 RHTLSRIDETPPQTVRPR--SKSL-QNSVDISSTRPILRSRSNISADTSRSVPVCNQSHE 475
+ D +R R KSL QN+ D S TR SAD +S V E
Sbjct: 126 KKLAESTDLRSKAQLRERLLRKSLKQNAEDSSPTRAASGGGWGSSADVKKSPEVSTGLFE 185
Query: 476 TVNQP 490
T P
Sbjct: 186 TALSP 190
>AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm
(myotubularin) family protein 1 protein.
Length = 588
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 381 TEFCKLFDRGRTVCGGVSSIRDRVCRLTGRYTFLSPISFGLLIF 250
T +CK + R C SS R VC RY F P+S L +F
Sbjct: 108 TIYCKDYRVYRFTCNPASSDRKNVCDSLNRYAF--PLSHNLPMF 149
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/115 (21%), Positives = 41/115 (35%)
Frame = +2
Query: 167 QAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQT 346
Q P PP Q +Q ++ + RP+ + + P R L ++ P Q
Sbjct: 378 QQPRYQGPPPPQQQQQQQPQQQQFSGEQS--RPQSHPNSQPTTPGPRGELPKMSGAP-QN 434
Query: 347 VRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQPEHGSPQY 511
+++S N+ ST RS P Q H+ P H +P +
Sbjct: 435 GNMQAESSSNASHSGSTSSQSGQRSGSPPGAVPPPPPPQQQHQQQQHPPHHAPPH 489
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical protein
D2045.1a protein.
Length = 959
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/115 (21%), Positives = 41/115 (35%)
Frame = +2
Query: 167 QAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQT 346
Q P PP Q +Q ++ + RP+ + + P R L ++ P Q
Sbjct: 703 QQPRYQGPPPPQQQQQQQPQQQQFSGEQS--RPQSHPNSQPTTPGPRGELPKMSGAP-QN 759
Query: 347 VRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQPEHGSPQY 511
+++S N+ ST RS P Q H+ P H +P +
Sbjct: 760 GNMQAESSSNASHSGSTSSQSGQRSGSPPGAVPPPPPPQQQHQQQQHPPHHAPPH 814
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/115 (21%), Positives = 41/115 (35%)
Frame = +2
Query: 167 QAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQT 346
Q P PP Q +Q ++ + RP+ + + P R L ++ P Q
Sbjct: 703 QQPRYQGPPPPQQQQQQQPQQQQFSGEQS--RPQSHPNSQPTTPGPRGELPKMSGAP-QN 759
Query: 347 VRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQPEHGSPQY 511
+++S N+ ST RS P Q H+ P H +P +
Sbjct: 760 GNMQAESSSNASHSGSTSSQSGQRSGSPPGAVPPPPPPQQQHQQQQHPPHHAPPH 814
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 28.3 bits (60), Expect = 3.6
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +2
Query: 122 MRDIEAAHFANAAGPQAPAR--NNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYR 295
+ DI A + + + Q P + ++PPT R + SH + L ++
Sbjct: 58 LMDISAGNASTSFQSQPPPQLESSPPTKWARIRTPPNRKKKISHEGPNQEALPPGFNLFS 117
Query: 296 PVRRHTLSRIDETPPQTVRPRSKSLQNSVDISSTRP 403
P R + +PP SL+ S+ ISS P
Sbjct: 118 PPSRKKIKTAFSSPPPKSMKTPDSLRKSIRISSPSP 153
>AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical
protein Y116A8C.16c protein.
Length = 982
Score = 28.3 bits (60), Expect = 3.6
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +2
Query: 119 QMRDIEAAHFANAAGPQAPARNNPPTSQHLSRQTSSI-----DTYNSHRKIKRPKLIGDK 283
+ +D+E + AGP R+ PT + R S I DT H + P+L G
Sbjct: 195 EQKDLEDGRMEDVAGPSFRIRSRKPTHPAIERSISLIDEVFFDTPPPHLRPIPPELQGPA 254
Query: 284 KVYRPVRRHTLSRIDETPPQTVR 352
+ P I ++PP + +
Sbjct: 255 GMPAPELEAYHPDIAQSPPTSAK 277
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 28.3 bits (60), Expect = 3.6
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +2
Query: 122 MRDIEAAHFANAAGPQAPAR--NNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYR 295
+ DI A + + + Q P + ++PPT R + SH + L ++
Sbjct: 58 LMDISAGNASTSFQSQPPPQLESSPPTKWARIRTPPNRKKKISHEGPNQEALPPGFNLFS 117
Query: 296 PVRRHTLSRIDETPPQTVRPRSKSLQNSVDISSTRP 403
P R + +PP SL+ S+ ISS P
Sbjct: 118 PPSRKKIKTAFSSPPPKSMKTPDSLRKSIRISSPSP 153
>U53339-1|AAA96197.3| 199|Caenorhabditis elegans Hypothetical
protein F58A6.2 protein.
Length = 199
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 378 EFCKLFDRGRTVCGGVS-SIRDRVCRLTGRYTFLSPISFGLLIFRWELY 235
EF + DR R V GG+ +C + G + + FGL IF W LY
Sbjct: 2 EFEENSDRFR-VFGGIHIKYVASICAVFGVFATIGVFLFGLWIFPWHLY 49
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 330 RRLRRRSGPDQRACRTRLTSRPRDRY 407
+R R RS +R RTR SR R+RY
Sbjct: 1528 KRARSRSAERRRRSRTRSRSRSRERY 1553
>AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 27.9 bits (59), Expect = 4.8
Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 1/81 (1%)
Frame = +2
Query: 293 RPVRRHT-LSRIDETPPQTVRPRSKSLQNSVDISSTRPILRSRSNISADTSRSVPVCNQS 469
RP R T LSR T P +V S SS P + S + +
Sbjct: 303 RPSRSDTILSRSVSTSPSSVTDNIPKTSTSRIPSSENPKTMEHTTTSRRFPTQTSILRKE 362
Query: 470 HETVNQPEHGSPQYAEPKDSD 532
HE V P H S + + S+
Sbjct: 363 HEIVQVPLHRSQSLRQSRISE 383
>AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical
protein K06A5.1 protein.
Length = 629
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/80 (23%), Positives = 33/80 (41%)
Frame = +2
Query: 269 LIGDKKVYRPVRRHTLSRIDETPPQTVRPRSKSLQNSVDISSTRPILRSRSNISADTSRS 448
++ + R R ++ + ETPP RSK +Q I P RSRS + +
Sbjct: 350 IVSEVSSRRSRSRCRVASLKETPPSLSTTRSKPIQQEKSI--RHPRSRSRSRVVLSENSC 407
Query: 449 VPVCNQSHETVNQPEHGSPQ 508
+ + + ++ G PQ
Sbjct: 408 AEIIKKRNPPRSKSVVGRPQ 427
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 330 RRLRRRSGPDQRACRTRLTSRPRDRY 407
+R R RS +R RTR SR R+RY
Sbjct: 153 KRARSRSAERRRRSRTRSRSRSRERY 178
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 27.5 bits (58), Expect = 6.3
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +2
Query: 167 QAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQT 346
+ PA+ PTS S S S R++ L+ ++ +P + PP T
Sbjct: 704 EPPAKRPTPTSSS-SHLIGSSSVGGSERELGGRGLVQQQQQQQPQAQSA------APPVT 756
Query: 347 VRPRSKSL-QNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQP 490
V + + + V+ +S P + S+ + +TS SVP + QP
Sbjct: 757 VSTAAAATAERLVNATSPSPSVASQHLVPTETSTSVPPVTIVPPAIQQP 805
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 27.5 bits (58), Expect = 6.3
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +2
Query: 167 QAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQT 346
+ PA+ PTS S S S R++ L+ ++ +P + PP T
Sbjct: 704 EPPAKRPTPTSSS-SHLIGSSSVGGSERELGGRGLVQQQQQQQPQAQSA------APPVT 756
Query: 347 VRPRSKSL-QNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQP 490
V + + + V+ +S P + S+ + +TS SVP + QP
Sbjct: 757 VSTAAAATAERLVNATSPSPSVASQHLVPTETSTSVPPVTIVPPAIQQP 805
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 27.5 bits (58), Expect = 6.3
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +2
Query: 167 QAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKKVYRPVRRHTLSRIDETPPQT 346
+ PA+ PTS S S S R++ L+ ++ +P + PP T
Sbjct: 704 EPPAKRPTPTSSS-SHLIGSSSVGGSERELGGRGLVQQQQQQQPQAQSA------APPVT 756
Query: 347 VRPRSKSL-QNSVDISSTRPILRSRSNISADTSRSVPVCNQSHETVNQP 490
V + + + V+ +S P + S+ + +TS SVP + QP
Sbjct: 757 VSTAAAATAERLVNATSPSPSVASQHLVPTETSTSVPPVTIVPPAIQQP 805
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 161 GPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKK 286
G P R N P QH SR S++ + S + LI +K
Sbjct: 802 GSMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHHALIDPQK 843
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 161 GPQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKLIGDKK 286
G P R N P QH SR S++ + S + LI +K
Sbjct: 800 GSMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHHALIDPQK 841
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 196 LPTPLPANLLHRHVQLPPEDQKTETYRR*ESVPA 297
+P P P ++LPP++ K RR +++PA
Sbjct: 71 IPVPDPTVDKQIKIELPPKESKNSDRRRKQNIPA 104
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 164 PQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKL 271
PQ+P+ TS+H R +S D +S+R + P++
Sbjct: 590 PQSPSPERQRTSRHADRDITSYDE-DSYRAVPPPRM 624
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 164 PQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKL 271
PQ+P+ TS+H R +S D +S+R + P++
Sbjct: 540 PQSPSPERQRTSRHADRDITSYDE-DSYRAVPPPRM 574
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 164 PQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKL 271
PQ+P+ TS+H R +S D +S+R + P++
Sbjct: 590 PQSPSPERQRTSRHADRDITSYDE-DSYRAVPPPRM 624
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 164 PQAPARNNPPTSQHLSRQTSSIDTYNSHRKIKRPKL 271
PQ+P+ TS+H R +S D +S+R + P++
Sbjct: 590 PQSPSPERQRTSRHADRDITSYDE-DSYRAVPPPRM 624
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,519,440
Number of Sequences: 27780
Number of extensions: 237634
Number of successful extensions: 1035
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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