SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_B14
         (554 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005288-1|AAH05288.1|  260|Homo sapiens TGF beta-inducible nucl...   312   4e-85
AY443419-1|AAS00024.1|  260|Homo sapiens TGF-beta inducible nucl...   312   4e-85
AJ012409-1|CAA10008.1|  260|Homo sapiens hypothetical protein pr...   312   4e-85
AF372458-1|AAK53761.1|  260|Homo sapiens hairy cell leukemia pro...   312   4e-85
AF077615-1|AAG43048.1|  260|Homo sapiens TGF beta inducible nucl...   312   4e-85
U66088-1|AAB17378.1|  643|Homo sapiens sodium iodide symporter p...    32   1.6  
D87920-1|BAA24835.1|  643|Homo sapiens sodium iodide symporter p...    32   1.6  
BC105049-1|AAI05050.1|  643|Homo sapiens solute carrier family 5...    32   1.6  
BC105047-1|AAI05048.1|  643|Homo sapiens solute carrier family 5...    32   1.6  
AC005796-2|AAC62827.1|  643|Homo sapiens sodium iodide symporter...    32   1.6  
BC026171-1|AAH26171.1|  778|Homo sapiens FAM47A protein protein.       31   2.7  
AL591625-1|CAI41438.1|  791|Homo sapiens family with sequence si...    31   2.7  

>BC005288-1|AAH05288.1|  260|Homo sapiens TGF beta-inducible nuclear
           protein 1 protein.
          Length = 260

 Score =  312 bits (767), Expect = 4e-85
 Identities = 142/168 (84%), Positives = 158/168 (94%)
 Frame = -2

Query: 553 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKAWKRMVTK 374
           R+ QSRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++GK K+KAWKRMVTK
Sbjct: 93  REGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTK 152

Query: 373 VTYVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLG 194
           V +VG+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+GVKKNPSS +YT+LG
Sbjct: 153 VCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLG 212

Query: 193 VITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 50
           VITKGTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVLLV
Sbjct: 213 VITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260


>AY443419-1|AAS00024.1|  260|Homo sapiens TGF-beta inducible nuclear
           protein protein.
          Length = 260

 Score =  312 bits (767), Expect = 4e-85
 Identities = 142/168 (84%), Positives = 158/168 (94%)
 Frame = -2

Query: 553 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKAWKRMVTK 374
           R+ QSRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++GK K+KAWKRMVTK
Sbjct: 93  REGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTK 152

Query: 373 VTYVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLG 194
           V +VG+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+GVKKNPSS +YT+LG
Sbjct: 153 VCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLG 212

Query: 193 VITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 50
           VITKGTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVLLV
Sbjct: 213 VITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260


>AJ012409-1|CAA10008.1|  260|Homo sapiens hypothetical protein
           protein.
          Length = 260

 Score =  312 bits (767), Expect = 4e-85
 Identities = 142/168 (84%), Positives = 158/168 (94%)
 Frame = -2

Query: 553 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKAWKRMVTK 374
           R+ QSRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++GK K+KAWKRMVTK
Sbjct: 93  REGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTK 152

Query: 373 VTYVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLG 194
           V +VG+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+GVKKNPSS +YT+LG
Sbjct: 153 VCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLG 212

Query: 193 VITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 50
           VITKGTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVLLV
Sbjct: 213 VITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260


>AF372458-1|AAK53761.1|  260|Homo sapiens hairy cell leukemia
           protein 1 protein.
          Length = 260

 Score =  312 bits (767), Expect = 4e-85
 Identities = 142/168 (84%), Positives = 158/168 (94%)
 Frame = -2

Query: 553 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKAWKRMVTK 374
           R+ QSRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++GK K+KAWKRMVTK
Sbjct: 93  REGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTK 152

Query: 373 VTYVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLG 194
           V +VG+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+GVKKNPSS +YT+LG
Sbjct: 153 VCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLG 212

Query: 193 VITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 50
           VITKGTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVLLV
Sbjct: 213 VITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260


>AF077615-1|AAG43048.1|  260|Homo sapiens TGF beta inducible nuclear
           protein TINP1 protein.
          Length = 260

 Score =  312 bits (767), Expect = 4e-85
 Identities = 142/168 (84%), Positives = 158/168 (94%)
 Frame = -2

Query: 553 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKAWKRMVTK 374
           R+ QSRAKVLSNMIKQKRKEKAGKW+VP+PKVRAQ + EV KV+++GK K+KAWKRMVTK
Sbjct: 93  REGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTK 152

Query: 373 VTYVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLG 194
           V +VG+ FTRKPPK+ERFIRPM LRFKKAHVTHPELKATFCLPI+GVKKNPSS +YT+LG
Sbjct: 153 VCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLG 212

Query: 193 VITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 50
           VITKGTVIEVN+SELGLVTQ GKV+WGKYAQVTNNPENDGCINAVLLV
Sbjct: 213 VITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260


>U66088-1|AAB17378.1|  643|Homo sapiens sodium iodide symporter
           protein.
          Length = 643

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 34/118 (28%), Positives = 49/118 (41%)
 Frame = +3

Query: 75  PSFSGLFVTCAYFPQTTLPACVTRPNSEMFTSITVPFVITPKLVYIWELGFFLTPIMGKQ 254
           P   GLF+ CAY    TL    T  N+    ++TV  +I P+L  +      L  I    
Sbjct: 337 PGVPGLFLACAY--SGTLSTASTSINA--MAAVTVEDLIKPRLRSLAPRK--LVIISKGL 390

Query: 255 NVAFNSGCVTCAFLKRSAIGLINLSNFGGLRVKFSPTYVTFVTMRFQAFLFVLPDCNT 428
           ++ + S C+T A L     G +   +F  + V   P    F+   F      LP CNT
Sbjct: 391 SLIYGSACLTVAALSSLLGGGVLQGSFTVMGVISGPLLGAFILGMF------LPACNT 442


>D87920-1|BAA24835.1|  643|Homo sapiens sodium iodide symporter
           protein.
          Length = 643

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 34/118 (28%), Positives = 49/118 (41%)
 Frame = +3

Query: 75  PSFSGLFVTCAYFPQTTLPACVTRPNSEMFTSITVPFVITPKLVYIWELGFFLTPIMGKQ 254
           P   GLF+ CAY    TL    T  N+    ++TV  +I P+L  +      L  I    
Sbjct: 337 PGVPGLFLACAY--SGTLSTASTSINA--MAAVTVEDLIKPRLRSLAPRK--LVIISKGL 390

Query: 255 NVAFNSGCVTCAFLKRSAIGLINLSNFGGLRVKFSPTYVTFVTMRFQAFLFVLPDCNT 428
           ++ + S C+T A L     G +   +F  + V   P    F+   F      LP CNT
Sbjct: 391 SLIYGSACLTVAALSSLLGGGVLQGSFTVMGVISGPLLGAFILGMF------LPACNT 442


>BC105049-1|AAI05050.1|  643|Homo sapiens solute carrier family 5
           (sodium iodide symporter), member 5 protein.
          Length = 643

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 34/118 (28%), Positives = 49/118 (41%)
 Frame = +3

Query: 75  PSFSGLFVTCAYFPQTTLPACVTRPNSEMFTSITVPFVITPKLVYIWELGFFLTPIMGKQ 254
           P   GLF+ CAY    TL    T  N+    ++TV  +I P+L  +      L  I    
Sbjct: 337 PGVPGLFLACAY--SGTLSTASTSINA--MAAVTVEDLIKPRLRSLAPRK--LVIISKGL 390

Query: 255 NVAFNSGCVTCAFLKRSAIGLINLSNFGGLRVKFSPTYVTFVTMRFQAFLFVLPDCNT 428
           ++ + S C+T A L     G +   +F  + V   P    F+   F      LP CNT
Sbjct: 391 SLIYGSACLTVAALSSLLGGGVLQGSFTVMGVISGPLLGAFILGMF------LPACNT 442


>BC105047-1|AAI05048.1|  643|Homo sapiens solute carrier family 5
           (sodium iodide symporter), member 5 protein.
          Length = 643

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 34/118 (28%), Positives = 49/118 (41%)
 Frame = +3

Query: 75  PSFSGLFVTCAYFPQTTLPACVTRPNSEMFTSITVPFVITPKLVYIWELGFFLTPIMGKQ 254
           P   GLF+ CAY    TL    T  N+    ++TV  +I P+L  +      L  I    
Sbjct: 337 PGVPGLFLACAY--SGTLSTASTSINA--MAAVTVEDLIKPRLRSLAPRK--LVIISKGL 390

Query: 255 NVAFNSGCVTCAFLKRSAIGLINLSNFGGLRVKFSPTYVTFVTMRFQAFLFVLPDCNT 428
           ++ + S C+T A L     G +   +F  + V   P    F+   F      LP CNT
Sbjct: 391 SLIYGSACLTVAALSSLLGGGVLQGSFTVMGVISGPLLGAFILGMF------LPACNT 442


>AC005796-2|AAC62827.1|  643|Homo sapiens sodium iodide symporter
           protein.
          Length = 643

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 34/118 (28%), Positives = 49/118 (41%)
 Frame = +3

Query: 75  PSFSGLFVTCAYFPQTTLPACVTRPNSEMFTSITVPFVITPKLVYIWELGFFLTPIMGKQ 254
           P   GLF+ CAY    TL    T  N+    ++TV  +I P+L  +      L  I    
Sbjct: 337 PGVPGLFLACAY--SGTLSTASTSINA--MAAVTVEDLIKPRLRSLAPRK--LVIISKGL 390

Query: 255 NVAFNSGCVTCAFLKRSAIGLINLSNFGGLRVKFSPTYVTFVTMRFQAFLFVLPDCNT 428
           ++ + S C+T A L     G +   +F  + V   P    F+   F      LP CNT
Sbjct: 391 SLIYGSACLTVAALSSLLGGGVLQGSFTVMGVISGPLLGAFILGMF------LPACNT 442


>BC026171-1|AAH26171.1|  778|Homo sapiens FAM47A protein protein.
          Length = 778

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = -2

Query: 436 VFKVLQSGKTKRKAWKRMVTKVTYVGE-NFTRKPPKFERFIRPMALRFKKAHVTHPELK 263
           + KVL SG+T +  W R   +V    E     K P  E  ++P   +    H  HP+ +
Sbjct: 428 ILKVLDSGRTLKDVWDRCEARVKKTKEPTEPHKSPCGEPCLQPPETQVSHPHPEHPKTR 486


>AL591625-1|CAI41438.1|  791|Homo sapiens family with sequence
           similarity 47, member A protein.
          Length = 791

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = -2

Query: 436 VFKVLQSGKTKRKAWKRMVTKVTYVGE-NFTRKPPKFERFIRPMALRFKKAHVTHPELK 263
           + KVL SG+T +  W R   +V    E     K P  E  ++P   +    H  HP+ +
Sbjct: 428 ILKVLDSGRTLKDVWDRCEARVKKTKEPTEPHKSPCGEPCLQPPETQVSHPHPEHPKTR 486


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,870,434
Number of Sequences: 237096
Number of extensions: 1859889
Number of successful extensions: 3896
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3896
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -