Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_B14
(554 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 26 0.22
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 26 0.22
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 25 0.39
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 24 1.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 2.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 3.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 3.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 3.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 3.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 4.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 4.8
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 4.8
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 4.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 4.8
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 4.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 4.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 4.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 4.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 4.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 4.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 4.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 4.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 4.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 4.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 4.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 4.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 4.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 4.8
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 22 4.8
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 8.4
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 8.4
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 26.2 bits (55), Expect = 0.22
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 80 ILWIVCYLCIFSPNYFTG 133
++WI+CY CI+ +TG
Sbjct: 215 VVWIMCYFCIWKGVKWTG 232
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 26.2 bits (55), Expect = 0.22
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 80 ILWIVCYLCIFSPNYFTG 133
++WI+CY CI+ +TG
Sbjct: 268 VVWIMCYFCIWKGVKWTG 285
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 25.4 bits (53), Expect = 0.39
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 77 IILWIVCYLCIFSPNYFTG 133
+++WI+CY CI+ TG
Sbjct: 181 LLVWILCYFCIWKGVKTTG 199
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 83 LWIVCYLCIFSPNYFTGLCHQ 145
++I+C+L F N ++G C Q
Sbjct: 343 VFIICWLPFFVVNLWSGFCSQ 363
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 391 KRMVTKVTYVGENFTRKPPKFERFIRPMALRFK 293
+ + ++ Y+G P F RFI P A RF+
Sbjct: 369 QEQIPRLRYIGP-----PTSFPRFIPPNAYRFR 396
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 381 PTSFPRFIPPNAYRFR 396
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 381 PTSFPRFIPPNAYRFR 396
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 381 PTSFPRFIPPNAYRFR 396
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 370 PTSFPRFIPPNAYRFR 385
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 152 PTPFPRFIPPNAYRFR 167
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 152 PTPFPRFIPPNAYRFR 167
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 152 PTPFPRFIPPNAYRFR 167
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 158 PTPFPRFIPPNAYRFR 173
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 153 PTPFPRFIPPNAYRFR 168
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 153 PTPFPRFIPPNAYRFR 168
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 162 PTPFPRFIPPNAYRFR 177
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 154 PTPFPRFIPPNAYRFR 169
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 164 PTPFPRFIPPNAYRFR 179
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 373 PTPFPRFIPPNAYRFR 388
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 379 PTPFPRFIPPNAYRFR 394
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 379 PTPFPRFIPPNAYRFR 394
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 399 PTPFPRFIPPNAYRFR 414
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 369 PTPFPRFIPPNAYRFR 384
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 380 PTPFPRFIPPNAYRFR 395
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 380 PTPFPRFIPPNAYRFR 395
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 369 PTPFPRFIPPNAYRFR 384
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 391 PTPFPRFIPPNAYRFR 406
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 340 PPKFERFIRPMALRFK 293
P F RFI P A RF+
Sbjct: 401 PTPFPRFIPPNAYRFR 416
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 381 LQKSHM*ERTLHVNHQSLK 325
++ +H+ RTLH+N SLK
Sbjct: 155 IENAHI-RRTLHMNRTSLK 172
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 21.8 bits (44), Expect = 4.8
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +2
Query: 362 YICDFCNHAF 391
Y+C+FCN +
Sbjct: 36 YVCEFCNRRY 45
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 8.4
Identities = 5/24 (20%), Positives = 14/24 (58%)
Frame = +2
Query: 440 SVSLCSDLWYWYIPFTGFLFTFLF 511
S +C +W +++P ++++ F
Sbjct: 215 SYLVCYGIWVYFVPLFLIIYSYWF 238
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.0 bits (42), Expect = 8.4
Identities = 5/24 (20%), Positives = 14/24 (58%)
Frame = +2
Query: 440 SVSLCSDLWYWYIPFTGFLFTFLF 511
S +C +W +++P ++++ F
Sbjct: 91 SYLVCYGIWVYFVPLFLIIYSYWF 114
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,098
Number of Sequences: 438
Number of extensions: 3430
Number of successful extensions: 43
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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