Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_B13
(519 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical pr... 54 5e-08
Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z73896-3|CAA98060.1| 208|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AC006655-2|AAF39876.1| 208|Caenorhabditis elegans Hypothetical ... 50 8e-07
Z70307-4|CAA94330.1| 209|Caenorhabditis elegans Hypothetical pr... 48 3e-06
AC006655-3|AAF39874.1| 208|Caenorhabditis elegans Hypothetical ... 48 3e-06
Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF078781-1|AAC26915.2| 258|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF016661-5|AAB66052.1| 207|Caenorhabditis elegans Hypothetical ... 44 5e-05
Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U42839-2|AAC69015.1| 425|Caenorhabditis elegans Venom-allergen-... 43 2e-04
U42839-1|AAM54195.1| 424|Caenorhabditis elegans Venom-allergen-... 43 2e-04
AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom allerge... 43 2e-04
Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81527-1|CAB04269.3| 290|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z73911-1|CAA98140.1| 262|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z70308-12|CAA94354.1| 211|Caenorhabditis elegans Hypothetical p... 34 0.070
Z70307-17|CAA94341.1| 211|Caenorhabditis elegans Hypothetical p... 34 0.070
Z78536-1|CAB01715.2| 417|Caenorhabditis elegans Hypothetical pr... 29 2.6
U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1... 29 2.6
U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1... 29 2.6
U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,... 29 2.6
Z77659-1|CAB01164.1| 401|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.10 protein.
Length = 207
Score = 58.4 bits (135), Expect = 3e-09
Identities = 43/128 (33%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Frame = +1
Query: 148 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 315
+N HN R +AKG + T + M WD + +N+ N T
Sbjct: 27 INAHNTLRSKIAKGTYVAKGTQKSPGTNLLKMKWDSAVAASA-------QNYANGCPTGH 79
Query: 316 SGRFQTGENLYWYSTTDSTYKLNV--DNAMESWFNEYNDYKYAPLKQSDFDKSKPRIGHY 489
SG GENLYWY T+ S LN A SW E+ DY + D IGH
Sbjct: 80 SGDAGLGENLYWYWTSGSLGDLNQYGSAASASWEKEFQDYGWKS-NLMTIDLFNTGIGHA 138
Query: 490 TQMAWSES 513
TQMAW++S
Sbjct: 139 TQMAWAKS 146
>Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical
protein C39E9.2 protein.
Length = 208
Score = 56.0 bits (129), Expect = 2e-08
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Frame = +1
Query: 148 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 315
+N HN R +AKG + PAA++M M WD + + N T
Sbjct: 28 LNVHNTLRSRIAKGTYVAKGTAKPAASDMLKMKWDATVAASAQA-------YANKCPTGH 80
Query: 316 SGRFQTGENLYWYSTTDSTYKLNVDNAMES--WFNEYNDYKYA--PLKQSDFDKSKPRIG 483
SG GENLYWY T+ + ++ A S W E+ DY ++ L S F+ IG
Sbjct: 81 SGAAGLGENLYWYWTSATITNIDQFGATGSAAWEKEFQDYGWSSNTLSMSLFNTG---IG 137
Query: 484 HYTQMAWSES 513
H TQMAW+++
Sbjct: 138 HATQMAWAKT 147
>Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical
protein C39E9.5 protein.
Length = 209
Score = 54.4 bits (125), Expect = 5e-08
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Frame = +1
Query: 52 VRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATE 219
++ L+LA+V C+G H++ + KQ VN HN R +AKG+ + +AT
Sbjct: 1 MQTALVLALV-CVG-AHAQ--FSEGGKQ--SMVNAHNAVRSSIAKGEYVAKGTKKDSATN 54
Query: 220 MKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYW-YSTTDST-YKLNVDN 393
M M WD L H+PDK+ G ENL+W YS++ T V +
Sbjct: 55 MLKMKWDNSLAQSAQNYANGCPMQHSPDKSYG-------ENLFWAYSSSPITDLDKYVQS 107
Query: 394 AMESWFNEYNDYKYAPLKQSDFDKSKPRIGHYTQMAWS 507
A+++W +E+ + + K + IGH TQ+AWS
Sbjct: 108 AVDTWVSEFQMFGWNSNKFTTA-LWNTGIGHATQVAWS 144
>Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.6 protein.
Length = 207
Score = 52.0 bits (119), Expect = 2e-07
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Frame = +1
Query: 67 ILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATEMKYMV 234
+L +V CI V S+ S Q + V+ HN R +AKG + + + M+ +
Sbjct: 4 LLLLVCCIAGVFSQFT---STGQ-QAIVDAHNKLRSSIAKGTYVAKGTTQKSGSNMRKIK 59
Query: 235 WDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNV--DNAMESW 408
WD + +N+ N T S GENLYWY T+ + L+ A SW
Sbjct: 60 WDATVATSA-------QNYANTCPTGHSQGSGYGENLYWYWTSGTIGNLDTFGPAASSSW 112
Query: 409 FNEYNDYKYAPLKQSDFDKSKPRIGHYTQMAWSES 513
+E+ Y + D + IGH TQMAW+ +
Sbjct: 113 ESEFQQYGWTS-NTLDMNTFNTGIGHATQMAWANT 146
>Z73896-3|CAA98060.1| 208|Caenorhabditis elegans Hypothetical
protein F09E8.5 protein.
Length = 208
Score = 50.8 bits (116), Expect = 6e-07
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Frame = +1
Query: 148 VNGHNYRRQLLAKGQVSGHP----AATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 315
+N HN R +AKG AA++M M W L ++ + N T
Sbjct: 28 LNVHNTLRSRIAKGTYVARGTVKHAASDMLKMKWLRSLATS-------SQIYANRCPTGH 80
Query: 316 SGRFQTGENLYWYSTTDSTYKLNVDNAMES--WFNEYNDYKYA--PLKQSDFDKSKPRIG 483
S GENLYWY T+ + ++ AM S W E+ DY ++ L S F+ +G
Sbjct: 81 SNMIGVGENLYWYWTSGTITNIDQFGAMASAAWEKEFQDYGWSSNTLTMSLFNSG---VG 137
Query: 484 HYTQMAWSES 513
H TQMAW+++
Sbjct: 138 HATQMAWAKT 147
>AC006655-2|AAF39876.1| 208|Caenorhabditis elegans Hypothetical
protein H10D18.4 protein.
Length = 208
Score = 50.4 bits (115), Expect = 8e-07
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Frame = +1
Query: 70 LAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATEMKYMVW 237
+ +C+ + + S V+ HN R +A+G + P+A+ M+ +VW
Sbjct: 1 MKFALCLLAIFGCATAQFSSTAQGQIVDAHNKLRSAIAQGSYVAAGTQEPSASNMRKIVW 60
Query: 238 DEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDN--AMESWF 411
DE + Q PD G+ GENLYW ++ + L+ A SW
Sbjct: 61 DETVAAAA-----QEYAEGCPDDHSGTSY---GENLYWSWSSSAPSSLDKFGVAASNSWE 112
Query: 412 NEYNDYKYAP--LKQSDFDKSKPRIGHYTQMAWSEST 516
+E+ Y + L ++ F IGH TQMAW+E++
Sbjct: 113 SEFQKYGWTSTFLDEAGFATG---IGHATQMAWAETS 146
>Z70307-4|CAA94330.1| 209|Caenorhabditis elegans Hypothetical
protein C39E9.4 protein.
Length = 209
Score = 48.4 bits (110), Expect = 3e-06
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Frame = +1
Query: 148 VNGHNYRRQLLAKG--QVSG--HPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 315
V+ HN R LA G ++G PA + ++ M WD L + + N T
Sbjct: 29 VDLHNSFRSKLATGTYSINGTLKPAGSNIRKMSWDSTLATSA-------QTYANTCPTGF 81
Query: 316 SGRFQTGENLYWYSTTDSTYKLNV--DNAMESWFNEYNDYKYAP--LKQSDFDKSKPRIG 483
S TGENLYW +T+ + L++ A SW E+ Y +A Q FD +G
Sbjct: 82 SNTQGTGENLYWRTTSANISGLDIYGGAASVSWEQEFQKYGWATNYFSQELFDTG---VG 138
Query: 484 HYTQMAWSES 513
+ TQMAW+++
Sbjct: 139 NGTQMAWAKT 148
>AC006655-3|AAF39874.1| 208|Caenorhabditis elegans Hypothetical
protein H10D18.2 protein.
Length = 208
Score = 48.4 bits (110), Expect = 3e-06
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 6/128 (4%)
Frame = +1
Query: 148 VNGHNYRRQLLAKGQVSG----HPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 315
V HN R +A G P A M+ + WD + Q N PD G
Sbjct: 27 VKAHNDLRSAIALGNYDAAGTIEPPAANMRKIKWDSTVASSAQ----QYANTC-PDDHSG 81
Query: 316 SGRFQTGENLYWYSTTDSTYKLNVDN--AMESWFNEYNDYKYAPLKQSDFDKSKPRIGHY 489
+ + GENLYW ++ + L+ A SW E+ DY + D D IGH
Sbjct: 82 T---EYGENLYWSWSSSAPTSLDKFGVAASNSWEKEFQDYGWESTYM-DADLFDSGIGHA 137
Query: 490 TQMAWSES 513
TQMAW+E+
Sbjct: 138 TQMAWAET 145
>Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical
protein F49E11.5 protein.
Length = 212
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Frame = +1
Query: 157 HNYRRQLLAKGQ-VSGH---PAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGR 324
HNY R +A G+ V+G+ P+A+ M ++WD L H+ + R
Sbjct: 34 HNYLRSQIALGKYVAGNSTKPSASNMMKLIWDTTLETTAQDYSTGCPTGHS------ASR 87
Query: 325 FQTGENLYWYST---TDSTYKLNVDNAMESWFNEYNDYKYAPLKQSDFDKSKPRIGHYTQ 495
GEN+YW+++ T + +L + + W +E+ + + ++ + IGH TQ
Sbjct: 88 ANIGENMYWWTSPVVTQTDAELLGNRSANLWESEFQRFGWNGNLLTE-ELFNSGIGHATQ 146
Query: 496 MAWS 507
MAW+
Sbjct: 147 MAWA 150
>Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical
protein F49E11.4 protein.
Length = 213
Score = 46.0 bits (104), Expect = 2e-05
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Frame = +1
Query: 52 VRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQVSGH----PAATE 219
+R +L+L IG V S N S + + +N HN R LA GQ+S P+A+
Sbjct: 1 MRTVLLLLFASAIG-VWSD---NFSKEGQLNLLNVHNEFRSQLALGQLSFRGVKKPSASM 56
Query: 220 MKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYW-YSTTDSTYKLNVDNA 396
M+ + W ++L H S TGE+++W +S++ ST + A
Sbjct: 57 MRKISWSKKLTNAATKFAETCPKNH-------SVVMNTGESIFWHFSSSLSTPEQYATLA 109
Query: 397 MESWFNEYNDYKYAPLKQSDFDKSKPRIGHYTQMAW 504
+ W+NE+ + L + + + +IGH QMAW
Sbjct: 110 PQKWWNEFETNGWDSLIYNHASQ-RFQIGHAVQMAW 144
>AF078781-1|AAC26915.2| 258|Caenorhabditis elegans Hypothetical
protein B0545.3 protein.
Length = 258
Score = 45.6 bits (103), Expect = 2e-05
Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 6/139 (4%)
Frame = +1
Query: 115 LNLSCKQIKDFVNGHNYRRQLLAKGQVSGH----PAATEMKYMVWDEELXXXXXXXXXQ- 279
LNL + ++ HN R +A GQ + P A M + WD EL Q
Sbjct: 43 LNLPARLQNLILDKHNEIRSQVALGQYAVDDDYLPPADNMVKLDWDCELELEAQQRAQQC 102
Query: 280 NKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYND-YKYAPLKQSD 456
N N + + GEN +++ TTD L+V A+ D A +K
Sbjct: 103 NLQKENSGRQMNGWDEVRGENAFYFRTTDG---LDVSGAVLKGIQRMGDEIAIAGIKNLK 159
Query: 457 FDKSKPRIGHYTQMAWSES 513
+ RIGH TQ+ W E+
Sbjct: 160 LSRYDSRIGHATQILWKET 178
>AF016661-5|AAB66052.1| 207|Caenorhabditis elegans Hypothetical
protein F02E11.5 protein.
Length = 207
Score = 44.4 bits (100), Expect = 5e-05
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Frame = +1
Query: 52 VRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKG-----QVSGHPAAT 216
+RAL++LA+V + V+ + S K V+ HN R +AKG + P +
Sbjct: 1 MRALILLAVVASVS-VYGQ----FSKAGQKAIVDAHNTLRSSIAKGTYVANKTRKEPGSN 55
Query: 217 EMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVD-- 390
+K M WD + + N T G G+ + GENLYW + + K D
Sbjct: 56 ILK-MKWDPTIAKSAQA-------YANTCPT-GHGKSKYGENLYW-RWSGAVIKSIDDYG 105
Query: 391 -NAMESWFNEYNDYKYAPLKQSDFDKSKPRIGHYTQMAWSES 513
A +W +E+ Y + K D K IGH TQMAW+ +
Sbjct: 106 VRASGAWASEFQKYGWKTNKL-DSALFKTGIGHATQMAWAST 146
>Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.9 protein.
Length = 207
Score = 42.7 bits (96), Expect = 2e-04
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Frame = +1
Query: 148 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 315
V+ HN R +AK + AT+M+ MV D + +N+ N T
Sbjct: 25 VDAHNKLRSAIAKSTYVAKGTKKEPATDMRKMVVDSTVAASA-------QNYANTCPTGH 77
Query: 316 SGRFQTGENLYWYSTTDSTYKLNV--DNAMESWFNEYNDYKYAPLKQSDFDKSKPRIGHY 489
S GENLYW T+ L+ + A +W E+ D+ + D IGH
Sbjct: 78 SKGTGYGENLYWSWTSADVGSLDSYGEIAAAAWEKEFQDFGWKS-NAMDTTLFNSGIGHA 136
Query: 490 TQMAWSEST 516
TQMAW+ ++
Sbjct: 137 TQMAWANTS 145
>U42839-2|AAC69015.1| 425|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform a protein.
Length = 425
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +1
Query: 334 GENLYWYSTTDSTYKLNVDNAMESWFNEYNDYKYAP---LKQSDFDKSKPRIGHYTQMAW 504
GENLY S + +++ ++W++E D+ L Q+ FD+ +GHYTQMAW
Sbjct: 306 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYTQMAW 362
Query: 505 SEST 516
+T
Sbjct: 363 EGTT 366
>U42839-1|AAM54195.1| 424|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform b protein.
Length = 424
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +1
Query: 334 GENLYWYSTTDSTYKLNVDNAMESWFNEYNDYKYAP---LKQSDFDKSKPRIGHYTQMAW 504
GENLY S + +++ ++W++E D+ L Q+ FD+ +GHYTQMAW
Sbjct: 305 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYTQMAW 361
Query: 505 SEST 516
+T
Sbjct: 362 EGTT 365
>AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom
allergen-like protein protein.
Length = 425
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +1
Query: 334 GENLYWYSTTDSTYKLNVDNAMESWFNEYNDYKYAP---LKQSDFDKSKPRIGHYTQMAW 504
GENLY S + +++ ++W++E D+ L Q+ FD+ +GHYTQMAW
Sbjct: 306 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYTQMAW 362
Query: 505 SEST 516
+T
Sbjct: 363 EGTT 366
>Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical
protein T05A10.5 protein.
Length = 246
Score = 39.5 bits (88), Expect = 0.001
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 9/128 (7%)
Frame = +1
Query: 157 HNYRRQLLAKG------QVSGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGS 318
HN+ R LAKG + P A++M M +D L H+
Sbjct: 62 HNFYRSRLAKGFEWNGETNTSQPKASQMIKMEYDCMLERFAQNWANNCVFAHSAHYE--- 118
Query: 319 GRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYNDYKYA---PLKQSDFDKSKPRIGHY 489
R G+NLY S ++ + + A+E W+ E ++ L +D IGHY
Sbjct: 119 -RPNQGQNLYMSSFSNPDPRSLIHTAVEKWWQELEEFGTPIDNVLTPELWDLKGKAIGHY 177
Query: 490 TQMAWSES 513
TQMAW +
Sbjct: 178 TQMAWDRT 185
>Z81527-1|CAB04269.3| 290|Caenorhabditis elegans Hypothetical
protein F35E12.1 protein.
Length = 290
Score = 37.5 bits (83), Expect = 0.006
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
Frame = +1
Query: 157 HNYRRQLLAKGQVSGH----PAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGR 324
HN R +AKG P A++M + WD+ + + H KT
Sbjct: 112 HNDLRSEIAKGLFLAKGIEKPPASDMMKISWDDSIAESAQTFIEKCPMNHT--KT----- 164
Query: 325 FQTGENLY--WYSTTDSTYKLNVDNAMESWFNEYNDYKYAPLKQSDFDKSKPRIGHYTQM 498
+ GEN++ W S + + A ESW E+ + + D K IGH TQM
Sbjct: 165 -EYGENMHRSWSSKEITDLDIYGTKAAESWAGEFQKKGWESNIYTK-DTEKSGIGHATQM 222
Query: 499 AWSES 513
WS++
Sbjct: 223 VWSQA 227
>Z73911-1|CAA98140.1| 262|Caenorhabditis elegans Hypothetical
protein T12A7.3 protein.
Length = 262
Score = 36.7 bits (81), Expect = 0.010
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +1
Query: 208 AATEMKYMVWDEELXXXXXXXXXQNKNFHN--PDKTLGSGRFQTGENLYWY-STTDSTYK 378
A + +K VW+ L +N + H+ PD GENL+W+ ST +
Sbjct: 104 AGSNIKKFVWNATLERSAYSFAQKNPSQHSFIPD---------IGENLFWHWSTRPGDFN 154
Query: 379 LNVDNAMESWFNEYNDYKYAPLKQSDFDKSKPRIGHYTQMAWSES 513
A SW E+ + K+ D +GH TQM W+++
Sbjct: 155 KYGPMAALSWIKEFRE-KFWDSNILTNDLFGSGVGHATQMVWADT 198
>Z70308-12|CAA94354.1| 211|Caenorhabditis elegans Hypothetical
protein F49E11.11 protein.
Length = 211
Score = 33.9 bits (74), Expect = 0.070
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Frame = +1
Query: 148 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 315
V+ HN R +AKG + A + + M WD L + F N
Sbjct: 29 VDLHNKLRTSIAKGTYVAKGTTKAAGSNLLKMKWDTTLATAA-------QTFANTCPRGH 81
Query: 316 SGRFQTGENLYWY--STTDSTYKLNVDNAMESWFNEYNDYKYAPLKQSDFDKSKPRIGHY 489
S GENLYW S S + A +W E+ Y + + + IGH
Sbjct: 82 SNAAGVGENLYWRWSSLPFSGMDIYGGAASVAWEQEFQQYGWTTNTFTQA-LANTGIGHA 140
Query: 490 TQMAWSES 513
TQMAW+ +
Sbjct: 141 TQMAWANT 148
>Z70307-17|CAA94341.1| 211|Caenorhabditis elegans Hypothetical
protein F49E11.11 protein.
Length = 211
Score = 33.9 bits (74), Expect = 0.070
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Frame = +1
Query: 148 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 315
V+ HN R +AKG + A + + M WD L + F N
Sbjct: 29 VDLHNKLRTSIAKGTYVAKGTTKAAGSNLLKMKWDTTLATAA-------QTFANTCPRGH 81
Query: 316 SGRFQTGENLYWY--STTDSTYKLNVDNAMESWFNEYNDYKYAPLKQSDFDKSKPRIGHY 489
S GENLYW S S + A +W E+ Y + + + IGH
Sbjct: 82 SNAAGVGENLYWRWSSLPFSGMDIYGGAASVAWEQEFQQYGWTTNTFTQA-LANTGIGHA 140
Query: 490 TQMAWSES 513
TQMAW+ +
Sbjct: 141 TQMAWANT 148
>Z78536-1|CAB01715.2| 417|Caenorhabditis elegans Hypothetical
protein C07A4.2 protein.
Length = 417
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 334 GENLYWYSTTDSTYKLNVDNAM-ESWFNEYNDYKYAPLKQSDFDKSKPRIGHYTQMAWSE 510
GENL+++ + A+ +S++ E Y Y+ + F K+ GH+TQ+ W
Sbjct: 305 GENLFFFGARHLPSPQTLAAAVIQSFYLEGIGYNYSSWRPMSFFKT----GHFTQLIWKN 360
Query: 511 S 513
S
Sbjct: 361 S 361
>U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1,
isoform c protein.
Length = 287
Score = 28.7 bits (61), Expect = 2.6
Identities = 24/101 (23%), Positives = 42/101 (41%)
Frame = +1
Query: 211 ATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVD 390
A++M + W +EL ++ D GR GEN++ + Y N
Sbjct: 97 ASDMNMLYWSDELAASA------QRHADTCDFRHSRGRINVGENIW-----AAPYS-NYS 144
Query: 391 NAMESWFNEYNDYKYAPLKQSDFDKSKPRIGHYTQMAWSES 513
+A+ WFNE ++ + K GHY Q+ W+++
Sbjct: 145 DAISIWFNEVHNPRCGCNHAY-----KHCCGHYVQVVWAKT 180
>U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1,
isoform b protein.
Length = 301
Score = 28.7 bits (61), Expect = 2.6
Identities = 24/101 (23%), Positives = 42/101 (41%)
Frame = +1
Query: 211 ATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVD 390
A++M + W +EL ++ D GR GEN++ + Y N
Sbjct: 97 ASDMNMLYWSDELAASA------QRHADTCDFRHSRGRINVGENIW-----AAPYS-NYS 144
Query: 391 NAMESWFNEYNDYKYAPLKQSDFDKSKPRIGHYTQMAWSES 513
+A+ WFNE ++ + K GHY Q+ W+++
Sbjct: 145 DAISIWFNEVHNPRCGCNHAY-----KHCCGHYVQVVWAKT 180
>U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,
isoform a protein.
Length = 312
Score = 28.7 bits (61), Expect = 2.6
Identities = 24/101 (23%), Positives = 42/101 (41%)
Frame = +1
Query: 211 ATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVD 390
A++M + W +EL ++ D GR GEN++ + Y N
Sbjct: 97 ASDMNMLYWSDELAASA------QRHADTCDFRHSRGRINVGENIW-----AAPYS-NYS 144
Query: 391 NAMESWFNEYNDYKYAPLKQSDFDKSKPRIGHYTQMAWSES 513
+A+ WFNE ++ + K GHY Q+ W+++
Sbjct: 145 DAISIWFNEVHNPRCGCNHAY-----KHCCGHYVQVVWAKT 180
>Z77659-1|CAB01164.1| 401|Caenorhabditis elegans Hypothetical
protein F23B12.1 protein.
Length = 401
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 197 DT*PLASNCLL*LCPLTKSLICLHDKFSRDLL 102
D LA NC+ ++K +IC+H S DL+
Sbjct: 217 DAFQLAFNCMPLCAVVSKKIICMHGGISEDLI 248
>Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical
protein R13H4.2a protein.
Length = 225
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 295 NPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYNDYKYAPLK 447
NP G + T YWY D Y + +S FN Y +Y Y P +
Sbjct: 105 NPYYWNNYGSYWTRYKGYWY---DYDYPSSYRRYTDSAFNRYLNYTYTPYR 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,066,932
Number of Sequences: 27780
Number of extensions: 245181
Number of successful extensions: 631
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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