Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_B10
(457 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1059 + 27273267-27273316,27274077-27274163,27274245-272743... 101 2e-22
03_02_0838 + 11641484-11642030,11643614-11643650,11643784-116438... 101 2e-22
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729... 54 7e-08
11_03_0144 + 10724538-10724753,10726127-10726186 39 0.002
04_04_0631 - 26728144-26728228,26728321-26728398,26728584-267286... 32 0.19
12_01_0549 + 4396159-4397327,4397341-4398353,4398609-4398676,439... 29 2.3
09_04_0190 - 15443764-15443838,15445360-15445458,15446396-154468... 29 2.3
06_01_0908 - 7006160-7007488 29 2.3
04_03_0594 - 17733827-17735085,17735576-17735642,17736379-177364... 29 2.3
09_02_0233 + 6113335-6113416,6113550-6113596,6114129-6114419,611... 28 3.1
07_03_1790 - 29536497-29536625,29536734-29536848,29537357-295375... 27 5.4
02_04_0333 + 22096960-22097445,22098508-22098643,22099159-220993... 27 5.4
01_06_0451 - 29476892-29477516,29477600-29477843,29478313-294787... 27 5.4
11_01_0117 + 906419-906524,907531-907667,907948-908055,909649-90... 27 7.2
08_02_0698 - 20151374-20151526,20153024-20153110,20153327-20153701 27 7.2
12_01_0127 + 963723-963828,965057-965193,965470-965577,965669-96... 27 9.5
11_01_0621 - 4981070-4981136,4982906-4983825 27 9.5
08_02_0831 + 21619891-21620724 27 9.5
04_03_0680 - 18613901-18614528,18614766-18615265 27 9.5
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 27 9.5
02_04_0640 - 24664841-24664855,24664895-24664978,24665232-246653... 27 9.5
01_06_1012 - 33806190-33807875,33807963-33808331 27 9.5
01_02_0111 - 11220179-11220322,11220430-11220497,11220611-112206... 27 9.5
>06_03_1059 +
27273267-27273316,27274077-27274163,27274245-27274392,
27274615-27274732,27274798-27274859
Length = 154
Score = 101 bits (243), Expect = 2e-22
Identities = 53/109 (48%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
Frame = +3
Query: 24 AKSAAPGGDTIFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIP--RKPISQLSK 197
A +A GG TIF KI+ KEIP+ VYED++ +AF D+NPQAP H+LVIP R ++ L K
Sbjct: 36 AATADTGGPTIFDKIIAKEIPSNVVYEDEKVLAFRDINPQAPVHVLVIPKIRDGLTGLDK 95
Query: 198 AGDEDEQLLGHLLIVARKVATQEGLDKSGFRLVINDGKNGAQSVYHLHV 344
A ++LG+LL A+ VA +EG+ + G+R+VIN NG + +Y LH+
Sbjct: 96 AEPRHVEILGYLLYAAKIVAEKEGIAE-GYRVVIN---NGPKGLYMLHI 140
>03_02_0838 +
11641484-11642030,11643614-11643650,11643784-11643841,
11646176-11646265,11646796-11646913,11648093-11648277,
11648330-11648455,11648578-11648634,11648741-11648821,
11649068-11649102,11649265-11649354,11649443-11649599,
11649785-11649901
Length = 565
Score = 101 bits (243), Expect = 2e-22
Identities = 47/94 (50%), Positives = 72/94 (76%), Gaps = 2/94 (2%)
Frame = +3
Query: 45 GDTIFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIP--RKPISQLSKAGDEDEQ 218
G +F KI++KEIP+ V++D++ +AF D+NPQAPTHI++IP + ++ LSKA + +
Sbjct: 192 GSQVFDKIIKKEIPSTVVFDDEKVLAFRDINPQAPTHIVIIPKVKDGLTGLSKAEERHVE 251
Query: 219 LLGHLLIVARKVATQEGLDKSGFRLVINDGKNGA 320
+LG+LL VA+ VA QEGL+ G+R+VINDG +G+
Sbjct: 252 ILGYLLYVAKVVAKQEGLE-DGYRIVINDGPSGS 284
>12_01_0796 +
7292523-7292783,7292963-7293018,7295274-7295331,
7295777-7295843,7296461-7296516,7296638-7296691,
7296836-7296961
Length = 225
Score = 53.6 bits (123), Expect = 7e-08
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +3
Query: 42 GGDTIFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDE-DEQ 218
G +F +I++ PA +YEDD C+ D P + H L+IP++ L
Sbjct: 70 GQRCVFCEIVKGNKPAYKLYEDDVCLCILDTKPLSTGHSLIIPKRHFPSLQATPPSVIAA 129
Query: 219 LLGHLLIVARKVATQEGLDKSGFRLVINDGKNGAQSVYHLHVHVLGGRQ 365
+ L +++ + D F +++N+GK Q ++H HVH++ R+
Sbjct: 130 ICCKLPLISSAIVKATQCD--AFNVLVNNGKVAGQVIFHTHVHLIPRRK 176
>11_03_0144 + 10724538-10724753,10726127-10726186
Length = 91
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 36 APGGDTIFGKILRKEIPAKFVYEDDQCVAFHDVNPQAP 149
A G +F +I+R E PA VYEDD C+ D +P AP
Sbjct: 53 AEGKSCVFCRIIRGEAPAFKVYEDDVCLCILDSHPLAP 90
>04_04_0631 -
26728144-26728228,26728321-26728398,26728584-26728650,
26728748-26728824,26729961-26730012,26730248-26730294,
26730457-26730527
Length = 158
Score = 32.3 bits (70), Expect = 0.19
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 153 HILVIPRKPISQLS--KAGDEDEQLLGHLLIVARKVATQEGLDKSGFRLVINDGKNGAQS 326
H LVIP + I ++ + ED QL+ H+L V R + ++ + R + + S
Sbjct: 58 HYLVIPIEHIPTVNNLQRTTEDHQLVSHMLAVGRDLLNRDAPNSEEQRFGFH--QPPFNS 115
Query: 327 VYHLHVHVL 353
V HLH+H L
Sbjct: 116 VDHLHLHCL 124
>12_01_0549 +
4396159-4397327,4397341-4398353,4398609-4398676,
4399229-4399291
Length = 770
Score = 28.7 bits (61), Expect = 2.3
Identities = 27/118 (22%), Positives = 50/118 (42%)
Frame = +3
Query: 9 GEVELAKSAAPGGDTIFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQ 188
G +E+ K G + + L + A+ +EDD + NP ++ P+S
Sbjct: 395 GHLEVGKQRTTSGSYEWKEDLLF-VAAEPFFEDDLELHVIVANPGKDEVVIGQQTVPLSS 453
Query: 189 LSKAGDEDEQLLGHLLIVARKVATQEGLDKSGFRLVINDGKNGAQSVYHLHVHVLGGR 362
+ K GDE + H ++ K + DK F ++DG + + + ++L GR
Sbjct: 454 IVKGGDEHD----HFDVMPSKWFDLKNPDKPQFDSSVDDGNDNSSRMRICLKNMLDGR 507
>09_04_0190 -
15443764-15443838,15445360-15445458,15446396-15446891,
15449436-15449479,15449999-15450104,15450243-15450314,
15450474-15450588,15451182-15451407
Length = 410
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 363 DVHPGRERASDIRSVP-HSCHHLLLNGNQTCPAPPGLPPYERQSTDDPAT 217
D P R R S I + P H L + N+ PAPP P ++ PA+
Sbjct: 191 DAAPSRRRRSAIATPPRHPRRRLAPHANRRRPAPPPASPILHRALSWPAS 240
>06_01_0908 - 7006160-7007488
Length = 442
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 408 IQKIPAIFNREATPIDVHPGRERASDIRSVPHSCHHLLLNGN 283
+ +P + R P DVH R A R +P + ++ NGN
Sbjct: 216 VHAVPVVAGRRTGPFDVHLDRINAEWTRRLPLLDYAVISNGN 257
>04_03_0594 -
17733827-17735085,17735576-17735642,17736379-17736413,
17736810-17737665
Length = 738
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 252 VATQEGLDKSGFRLVINDGKNGAQSVYHLHVHVLG 356
+A Q G +GF+L ND NG ++ +V VLG
Sbjct: 27 IAGQPGCAMTGFKLSCNDTGNGVPTLLLRNVEVLG 61
>09_02_0233 +
6113335-6113416,6113550-6113596,6114129-6114419,
6114651-6114668
Length = 145
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 301 MMARMGHRAYITCTFTSWVDVNWSGLPVK 387
M+ +M ++ C F WVD W L K
Sbjct: 35 MIKKMQDARWVKCHFVKWVDPEWDELAAK 63
>07_03_1790 -
29536497-29536625,29536734-29536848,29537357-29537508,
29537589-29537737,29538936-29539098,29539575-29539686,
29539791-29540152
Length = 393
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 291 NGNQTCPAPPGLP-PYERQSTDDPATAHLHL 202
+G CP PP P P + ++DD A H H+
Sbjct: 69 SGTGECPPPPPAPLPPDELASDDDAYYHEHI 99
>02_04_0333 +
22096960-22097445,22098508-22098643,22099159-22099325,
22099447-22099567,22099660-22099760,22099908-22100006,
22100512-22100622,22100709-22100788,22100880-22100949,
22101880-22101965,22102097-22102166,22102250-22102338,
22102448-22102572,22102686-22102766,22102848-22102908,
22103002-22103060,22103134-22103273,22103391-22103480,
22103917-22103976,22104072-22104188
Length = 782
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 42 GGDTIFGKILRKEIPAKFVYEDDQCVA--FHDVNPQAPTHILVIPRKPISQLSKAGDE 209
GG T +++R+++ AK++ E + F + Q T + ++P++ + QLS+ D+
Sbjct: 208 GGMTEEKRVMRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQ 265
>01_06_0451 -
29476892-29477516,29477600-29477843,29478313-29478714,
29481164-29481358,29481418-29481537,29481615-29481683,
29481901-29481999,29483857-29483946,29484049-29484180,
29485062-29485173
Length = 695
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 273 PAPPGLPPYERQSTDDPATAHLH 205
PAP GLPP E + +PA A H
Sbjct: 239 PAPVGLPPSEGNARGNPAYAPRH 261
>11_01_0117 +
906419-906524,907531-907667,907948-908055,909649-909750,
909946-910033,910326-910560,910625-910715
Length = 288
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 162 VIPRKPISQLSKAGDEDEQLLGHLLIVARKVATQ-EGLDKSG---FRL-VINDGKNGAQS 326
++P P ++ + D + L + A++V + E K+ F + + DG Q+
Sbjct: 33 LLPVCPKREVKRFADLSSNEISDLWVTAKEVGIRLEQYHKASSLTFAIQCLQDGPQAGQT 92
Query: 327 VYHLHVHVL 353
V H+H+HV+
Sbjct: 93 VPHVHIHVI 101
>08_02_0698 - 20151374-20151526,20153024-20153110,20153327-20153701
Length = 204
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 143 LWVHIMKSYTLIIFIDEFCRYFFA*YFPKYSI 48
L +H + +YTLII C FF+ + PK ++
Sbjct: 148 LSLHRLPAYTLIIECTNICMCFFSGFNPKENV 179
>12_01_0127 +
963723-963828,965057-965193,965470-965577,965669-965785
Length = 155
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +3
Query: 162 VIPRKPISQLSKAGDEDEQLLGHLLIVARKVATQ-EGLDKSG---FRL-VINDGKNGAQS 326
++P P ++ + D L + A++V + E K+ F + + DG Q+
Sbjct: 33 LLPVCPKREVKRFADLSSNETSDLWVTAKEVGVRLEQYHKASSLTFAIQCLQDGPEAGQT 92
Query: 327 VYHLHVHVL 353
V H+H+HV+
Sbjct: 93 VSHVHIHVI 101
>11_01_0621 - 4981070-4981136,4982906-4983825
Length = 328
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 348 RERASDIRSVPHSCHHLLLNGNQTCPAPPGLPPY 247
RE +R +P SC+ L L P PP PP+
Sbjct: 102 REMLDLVRGLPESCYELSLRDIVESPPPP--PPH 133
>08_02_0831 + 21619891-21620724
Length = 277
Score = 26.6 bits (56), Expect = 9.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 149 WCLWVHIMKSYTLIIFIDEFCRYFFA 72
W LWV+++ + LI+ + F + FA
Sbjct: 72 WLLWVYLLAMFALIVALLGFTAFAFA 97
>04_03_0680 - 18613901-18614528,18614766-18615265
Length = 375
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 216 QLLGHLLIVARKVATQEGLDKSGFRLVINDGK 311
++LG L R + GL K+GF +V+ DGK
Sbjct: 107 EVLGSLEQQNRMLPPMPGLTKAGFSVVVLDGK 138
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = -1
Query: 91 FAGISLRNIFPNIVS---PPGAADFASSTSPLV 2
FAG+ R++FP+ S PP A AS+ +P +
Sbjct: 449 FAGVLFRHLFPSKTSAPPPPSADGDASAAAPYI 481
>02_04_0640 -
24664841-24664855,24664895-24664978,24665232-24665319,
24665457-24667318
Length = 682
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 300 LLLNGNQTCPAPPGLPPYERQS 235
+L CP+PPGL P RQ+
Sbjct: 590 MLQRSQNQCPSPPGLRPQLRQT 611
>01_06_1012 - 33806190-33807875,33807963-33808331
Length = 684
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 170 GYHKDMGWCLWVHIMKSYTLIIFIDEFCRYF 78
GY+K++GW + V +S L + C Y+
Sbjct: 476 GYYKELGWSVEVEFDESILLWHIATDLCFYY 506
>01_02_0111 -
11220179-11220322,11220430-11220497,11220611-11220644,
11220735-11220766,11220900-11220959,11221276-11221729
Length = 263
Score = 26.6 bits (56), Expect = 9.5
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +3
Query: 129 DVNPQAPTHILVIPR 173
D +P+APTH+ ++PR
Sbjct: 35 DTSPRAPTHVALLPR 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,282,284
Number of Sequences: 37544
Number of extensions: 306469
Number of successful extensions: 919
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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