Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_B10
(457 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical pr... 162 1e-40
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 50 8e-07
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 50 8e-07
U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical pr... 39 0.001
Z81491-11|CAM84809.1| 226|Caenorhabditis elegans Hypothetical p... 27 4.9
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 27 4.9
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 27 4.9
>Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical
protein F21C3.3 protein.
Length = 130
Score = 162 bits (393), Expect = 1e-40
Identities = 70/112 (62%), Positives = 92/112 (82%)
Frame = +3
Query: 48 DTIFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDEDEQLLG 227
DT+FGKI+RKEIPAK ++EDD+ +AFHDV+PQAP H LVIP++ I L A D D L+G
Sbjct: 20 DTLFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDMLENAVDSDAALIG 79
Query: 228 HLLIVARKVATQEGLDKSGFRLVINDGKNGAQSVYHLHVHVLGGRQLEWPPG 383
L++ A KVA Q G+ +G+R+V+N+GK+GAQSV+HLH+HVLGGRQL+WPPG
Sbjct: 80 KLMVTASKVAKQLGM-ANGYRVVVNNGKDGAQSVFHLHLHVLGGRQLQWPPG 130
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 50.0 bits (114), Expect = 8e-07
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +3
Query: 63 KILRKEIPAKFV-YEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDEDEQLLGHLLI 239
K R IPA + Y F ++ P H+LV P++ + +L+ D + L I
Sbjct: 300 KFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAET---ADLFI 356
Query: 240 VARKVAT--QEGLDKSGFRLVINDGKNGAQSVYHLHVHVLGGR 362
VA+KV ++ + + + + DGK+ Q+V H+H+H+L R
Sbjct: 357 VAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRR 399
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 50.0 bits (114), Expect = 8e-07
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +3
Query: 63 KILRKEIPAKFV-YEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDEDEQLLGHLLI 239
K R IPA + Y F ++ P H+LV P++ + +L+ D + L I
Sbjct: 300 KFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAET---ADLFI 356
Query: 240 VARKVAT--QEGLDKSGFRLVINDGKNGAQSVYHLHVHVLGGR 362
VA+KV ++ + + + + DGK+ Q+V H+H+H+L R
Sbjct: 357 VAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRR 399
>U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical
protein C26F1.7 protein.
Length = 175
Score = 39.1 bits (87), Expect = 0.001
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Frame = +3
Query: 72 RKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDEDEQLLGHLLIVARK 251
+KE+ K E+ CV +D+ P+A H LV+ ++ I++ + D LL + R+
Sbjct: 20 KKELQLK---ENKSCVVINDIKPKAKNHYLVLSKQHIAKPTDLTVADVPLLEEMEKTGRE 76
Query: 252 VATQEGLDKSGFRLVINDG-KNGAQ-----SVYHLHVHVL 353
+ +E L K G + D + G SV+HLH+H++
Sbjct: 77 L-LREHLKKKGEADTVEDMLRIGFHLPPLLSVHHLHMHII 115
>Z81491-11|CAM84809.1| 226|Caenorhabditis elegans Hypothetical
protein D1086.17 protein.
Length = 226
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 93 FVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDEDEQLLGHLL 236
F YE + V P I I Q+ KAGD+D +++G++L
Sbjct: 29 FAYEGNVAVKCSKYLPVDHRQNFTITHARILQVEKAGDKDFKIVGNIL 76
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical
protein E03A3.6 protein.
Length = 2089
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 330 IRSVPHSCHHLLLNGNQTC 274
IR+VPHSCH L+G C
Sbjct: 705 IRAVPHSCHDPELDGFADC 723
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical
protein E03A3.6 protein.
Length = 2089
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 330 IRSVPHSCHHLLLNGNQTC 274
IR+VPHSCH L+G C
Sbjct: 705 IRAVPHSCHDPELDGFADC 723
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 330 IRSVPHSCHHLLLNGNQTC 274
IR+VPHSCH L+G C
Sbjct: 698 IRAVPHSCHDPELDGFADC 716
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,838,349
Number of Sequences: 27780
Number of extensions: 241758
Number of successful extensions: 617
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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