Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_B08
(421 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0751 + 7095707-7095846,7095944-7096009,7096236-7096296 32 0.16
08_01_0739 + 6798592-6798731,6798829-6798894,6799121-6799181 32 0.16
12_02_0094 - 13556672-13556893,13557335-13557478 31 0.28
02_05_0683 + 30877731-30878243 31 0.50
09_02_0425 + 9167684-9167803,9168034-9168108,9168200-9168653,916... 30 0.87
12_01_0373 + 2897874-2898911 29 1.5
11_01_0763 + 6402901-6403971,6404581-6404826 29 2.0
09_04_0328 + 16711336-16711731,16711818-16711956,16712533-16713116 29 2.0
05_01_0002 - 8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,9... 29 2.0
10_01_0169 - 1899491-1899666,1901358-1901638,1902468-1902477,190... 28 2.7
08_02_0091 + 12258666-12258974,12259195-12259637,12259732-122598... 28 2.7
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 28 2.7
03_01_0485 + 3695857-3695951,3696489-3696597,3696746-3696886,369... 28 2.7
02_01_0434 + 3158637-3159319,3159460-3159576,3160064-3160226,316... 28 2.7
09_04_0168 - 15295442-15295477,15295478-15295552,15295660-152957... 28 3.5
03_02_0581 - 9617039-9617936,9618057-9618502,9618985-9619071,961... 28 3.5
11_06_0425 - 23365108-23366028,23366182-23366340,23366445-233666... 27 4.6
10_06_0029 + 9822216-9823124,9825210-9825329,9826188-9826304,982... 27 4.6
03_02_0539 - 9329572-9330729,9330988-9331041 27 4.6
01_06_0038 - 25819433-25820344 27 4.6
08_02_0703 - 20188489-20190246 27 6.1
03_06_0548 - 34660096-34660499,34660630-34660726 27 6.1
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 6.1
02_05_0391 + 28563242-28563302,28563714-28563931,28564563-285646... 27 6.1
10_07_0120 + 13076748-13076955,13077060-13077370 27 8.1
05_05_0216 + 23364281-23364660,23365033-23365042 27 8.1
05_01_0570 + 5061600-5062142,5062790-5062972 27 8.1
04_04_1465 + 33794225-33794389,33794471-33794597,33794669-337947... 27 8.1
>08_01_0751 + 7095707-7095846,7095944-7096009,7096236-7096296
Length = 88
Score = 32.3 bits (70), Expect = 0.16
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 237 GSTGALAARPR----TIAAPASARSGTRCSSASTSVGTSCTAWRARAVRAP 377
G +GA RP T+AA A R+G CS+A+ G TAW A+ P
Sbjct: 7 GGSGAAPGRPTGQRGTVAAAARHRAG--CSAAADPTGVWTTAWAKPAMERP 55
>08_01_0739 + 6798592-6798731,6798829-6798894,6799121-6799181
Length = 88
Score = 32.3 bits (70), Expect = 0.16
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 237 GSTGALAARPR----TIAAPASARSGTRCSSASTSVGTSCTAWRARAVRAP 377
G +GA RP T+AA A R+G CS+A+ G TAW A+ P
Sbjct: 7 GGSGAAPGRPTGQRGTVAAAARHRAG--CSAAADPTGVWTTAWAKPAMERP 55
>12_02_0094 - 13556672-13556893,13557335-13557478
Length = 121
Score = 31.5 bits (68), Expect = 0.28
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = -1
Query: 346 VHDVPTLVLADEQRVPDLALAGAAIVRGLAASAPVEPHGQAARAHHLQR--AGRGS*RLH 173
+H P L+LAD+ R PD LA ++ L HG AA L R R H
Sbjct: 26 MHPAPRLLLADDSRCPDRFLAVQDCMKVLRFCGSYCDHGPAADIKKLFRISTDRHPRHGH 85
Query: 172 EARAHGAVQPR-VGHADVTRQVPRQVNHRYYRFE 74
R+ A + G A+++ R N+ + R++
Sbjct: 86 RQRSSPAANMKGRGDAEMSTWDERAANNDWLRWQ 119
>02_05_0683 + 30877731-30878243
Length = 170
Score = 30.7 bits (66), Expect = 0.50
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 237 GSTGALAARPRTIAAPASARSGTRCSSASTSVGT 338
GST A+AAR T+A P +A + R S +T G+
Sbjct: 134 GSTAAMAARGSTVAVPVAAAAVARGSRGNTCGGS 167
>09_02_0425 +
9167684-9167803,9168034-9168108,9168200-9168653,
9168735-9168784
Length = 232
Score = 29.9 bits (64), Expect = 0.87
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 262 LAASAPVEPHGQAARAHHLQRAGRGS*RLHEARAHGAVQPRVGHADVTRQVPRQ 101
LAA+AP AAR + R ++ E HGAV R GH+ V + ++
Sbjct: 107 LAAAAPARDSSGAARVDDQELLARRKNKVGETALHGAV--RAGHSKVVEVLMKE 158
>12_01_0373 + 2897874-2898911
Length = 345
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 TIAAPASARSGTRCSSASTS-VGTSCTAWRARAVRAPHCKG 389
T AA + S T CS+ASTS T+ A A A C G
Sbjct: 273 TTAAATTTTSDTSCSTASTSTTSNGATSVTAAATAAEQCGG 313
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 237 GSTGALAARPRTIAAPASARSGTRCSSASTSVGTSCTAWRARAVR 371
G GA +R R PA+A + RC+ A+T+ + W RA R
Sbjct: 76 GGDGAATSRRRLARQPAAAVAAARCARAATA--AAWRPWWQRAER 118
>09_04_0328 + 16711336-16711731,16711818-16711956,16712533-16713116
Length = 372
Score = 28.7 bits (61), Expect = 2.0
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 258 ARPR-TIAAPASARSGTRCSSASTSVGTSCTAWRARAVRAPHCKGSCASR 404
A+P+ T AAP AR+ RCSS S+S+ + A A A A +C+ S + R
Sbjct: 223 AQPQATPAAPGVARAPPRCSS-SSSLKRAAPAEDA-AAEAEYCRQSSSKR 270
>05_01_0002 - 8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,
9802-9902,10016-10651,10820-10899,11014-11673,
11787-12041,12154-12281,12515-12669,12735-12919,
13020-13049,13164-13239,13371-13504,13703-13994,
14400-14567,14647-14745,14843-15014,15103-15281
Length = 1352
Score = 28.7 bits (61), Expect = 2.0
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = -1
Query: 250 APVEPHGQAARAHHLQRAGRGS*RLHEARAHGAVQPRVGHADVTRQVPRQVNHRYYRFEI 71
A E G+AA Q A G R+H AV+P H VPR +N +F
Sbjct: 1014 AKAESEGEAAENTEAQDADAGISLPFSERSHNAVKPLAKH------VPRALNDHEEKFSC 1067
Query: 70 LYF 62
+++
Sbjct: 1068 IFY 1070
>10_01_0169 -
1899491-1899666,1901358-1901638,1902468-1902477,
1902696-1902786,1903993-1904031,1904117-1904405,
1904488-1904658,1904737-1905623,1905711-1906157,
1906236-1906460,1906536-1906943
Length = 1007
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -1
Query: 232 GQAARAHHLQRAGRGS*RLHEARAHG 155
GQ R H L R GRGS L AR+ G
Sbjct: 867 GQRRRRHRLGRGGRGSDALPSARSGG 892
>08_02_0091 +
12258666-12258974,12259195-12259637,12259732-12259873,
12259985-12260209,12260340-12260402,12260486-12260560,
12261900-12262160
Length = 505
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 107 WNLARNIRVSDPRLHRAMRTCLMQTLRAAAGTLQVVRARGLPV 235
WN+ IR + ++ + M C +A GT+ RGLP+
Sbjct: 368 WNVPVKIRGFEKQMEKWMGACDCIITKAGPGTIAEALIRGLPI 410
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 86 VPMVHLTWNLARNIRVSDPRLHRAMRTCLMQTLRAA 193
V + L + AR+ R+S RL A++ CL ++LRAA
Sbjct: 398 VTLPKLVESYARDARLSPERLVDAVQRCLPESLRAA 433
>03_01_0485 +
3695857-3695951,3696489-3696597,3696746-3696886,
3696986-3697099,3697558-3697636,3698163-3698272,
3698344-3698400,3698520-3698609
Length = 264
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 340 DVPTLVLADEQRVPDLALAGAAIV 269
DV +++ EQRVPD AGA IV
Sbjct: 112 DVHLMIVEPEQRVPDFIKAGADIV 135
>02_01_0434 +
3158637-3159319,3159460-3159576,3160064-3160226,
3160394-3160600
Length = 389
Score = 28.3 bits (60), Expect = 2.7
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 283 GAAIVRGLAASAPVEPHGQAARAHHLQRAGRGS*RLHEA--RAHGAVQPRVGHADVTR 116
GAA +G+ A+AP PHG R H +G+ + + RA RVG A R
Sbjct: 84 GAAFAKGVLAAAPPPPHG---RPPHKLMVCKGAPTVTDVKLRAQARAAARVGVAAAVR 138
>09_04_0168 -
15295442-15295477,15295478-15295552,15295660-15295722,
15296095-15296319,15296421-15296562,15296678-15296839,
15298148-15298320,15300352-15300882
Length = 468
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/65 (21%), Positives = 27/65 (41%)
Frame = +2
Query: 68 QNFKSIVPMVHLTWNLARNIRVSDPRLHRAMRTCLMQTLRAAAGTLQVVRARGLPVRFHG 247
+N K + + W + ++ ++ M C +A GT+ RGLP+ +G
Sbjct: 393 RNKKLTSRLQSINWKVPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNG 452
Query: 248 RARGE 262
G+
Sbjct: 453 YIAGQ 457
>03_02_0581 -
9617039-9617936,9618057-9618502,9618985-9619071,
9619276-9619416,9620220-9620411,9620491-9620652,
9621116-9621199,9621329-9621706
Length = 795
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 65 VQNFKSIVPMVHLTWNLARNIRVSDPRLHRAMRTC 169
+Q+ KSI+ V TW + ++ + D R +RTC
Sbjct: 467 MQSVKSIIETVERTWTIRKSCNIRDVR--NILRTC 499
>11_06_0425 -
23365108-23366028,23366182-23366340,23366445-23366640,
23366995-23367527,23367817-23368272,23368507-23368758,
23368890-23369007,23369836-23369993
Length = 930
Score = 27.5 bits (58), Expect = 4.6
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +3
Query: 243 TGALAARPRTIAAPASARS-GTRCSS--ASTSV--GTSCTAWRARAVRA 374
T A+A T+AAPA+ + GT C S A V C A R +AV A
Sbjct: 668 TAAMAMSAETVAAPANCGTCGTACDSNMAGDKVVAAARCKAARCKAVAA 716
>10_06_0029 +
9822216-9823124,9825210-9825329,9826188-9826304,
9826387-9826476,9826706-9826756
Length = 428
Score = 27.5 bits (58), Expect = 4.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 240 STGALAARPRTIAAPASARSGTRCSSASTSVGTSCTAWRARAVRAPH 380
S A + PR A S SS+S+S SC+A R APH
Sbjct: 28 SAAAACSTPRRGKTSPHASSRHASSSSSSSSLPSCSAARVAVTPAPH 74
>03_02_0539 - 9329572-9330729,9330988-9331041
Length = 403
Score = 27.5 bits (58), Expect = 4.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 237 GSTGALAARPRTIAAPASARSGTRCSSASTSVGTSCTAWRARAVRAP 377
G T A AA P S+ S + ++A+ + A RAR RAP
Sbjct: 39 GPTAAAAAPGEIGGLPTSSSSASAAAAAAQQARPNSMAERARLARAP 85
>01_06_0038 - 25819433-25820344
Length = 303
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 246 GALAARPRTIAAPASARSGTRCSSASTSVGTSCTAWRA 359
G A P AAP+S+ S + SSA T WRA
Sbjct: 173 GGACAFPTAAAAPSSSSSSSSSSSAGGRKLVEETVWRA 210
>08_02_0703 - 20188489-20190246
Length = 585
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 249 ALAARPRTIAA--PASARSGTRCSSASTSVGTS 341
A AAR T+AA PA + S CSS +++ TS
Sbjct: 139 AAAARTTTVAAMVPARSSSNLSCSSRASAASTS 171
>03_06_0548 - 34660096-34660499,34660630-34660726
Length = 166
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 95 VHLTWNLARNIRVSDPRLHRAMRTCLMQTLRAAAGTLQVVRARGLP 232
+HL AR R RL R +R L++ LRA G + R R P
Sbjct: 79 LHLPRQDARPARPRRRRLRRLLRPLLLRVLRAVPGVPRARRPRLRP 124
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 101 LTWNLARNIRVSDPRLHRAMRTCLMQTLRAAAGTLQVVRARGLPV 235
L W + +R + ++ + M C +A GT+ RGLP+
Sbjct: 360 LEWKIPIKVRGFETQMEKWMGACDCIITKAGPGTIAEALIRGLPI 404
>02_05_0391 +
28563242-28563302,28563714-28563931,28564563-28564637,
28564730-28565264,28565343-28565523,28565586-28565724,
28565826-28566067,28566157-28566322,28566591-28566698
Length = 574
Score = 27.1 bits (57), Expect = 6.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 254 RGEASHYCGACEREVW 301
RG +HYC C ++VW
Sbjct: 549 RGCRTHYCALCSKKVW 564
>10_07_0120 + 13076748-13076955,13077060-13077370
Length = 172
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 255 AARPRTIAAPASARSGTRCSSASTS 329
+ R R P++AR+GT C SA+TS
Sbjct: 3 SGRGRRRWCPSTARTGTACLSAATS 27
>05_05_0216 + 23364281-23364660,23365033-23365042
Length = 129
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 152 RAMRTCLMQTLRAAAGTLQVVRARGLPVR 238
RA TCL AAG + RA GLP R
Sbjct: 82 RAACTCLKNVAAGAAGGPYISRAAGLPGR 110
>05_01_0570 + 5061600-5062142,5062790-5062972
Length = 241
Score = 26.6 bits (56), Expect = 8.1
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 4 RGAR*QRGVLARARTVRVEQSTKFQIDSTDGSPDVEPGA*HPRVRPEAAPR 156
RG+ L RA RVE+ TK +D + VE RV A PR
Sbjct: 89 RGSAPASSRLNRAPRCRVEEGTKATVDGGEEDSAVEWNGGPTRVHGSARPR 139
>04_04_1465 +
33794225-33794389,33794471-33794597,33794669-33794799,
33795153-33795254,33795337-33795420,33795504-33795731,
33795934-33796038,33796376-33796731,33797146-33797303,
33797399-33797505,33797852-33798061
Length = 590
Score = 26.6 bits (56), Expect = 8.1
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -1
Query: 364 ARARQAV--HDVPTLVLADEQRVPD-LALAGAAIVRGLAASAPVEP 236
ARA +AV HD LVLA++ R PD L A+I G A A P
Sbjct: 21 ARAAEAVPLHDALGLVLAEDVRAPDPLPPFRASIKDGYAVVASDGP 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,637,641
Number of Sequences: 37544
Number of extensions: 227309
Number of successful extensions: 1228
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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