Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_B08
(421 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 32 0.007
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 25 1.5
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 24 2.6
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 23 3.4
EF519462-1|ABP73533.1| 147|Anopheles gambiae CTLMA2 protein. 23 4.5
EF519450-1|ABP73509.1| 151|Anopheles gambiae CTLMA2 protein. 23 4.5
AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein. 23 4.5
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 23 6.0
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 22 7.9
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 22 7.9
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 32.3 bits (70), Expect = 0.007
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = -1
Query: 301 PDLALAGAAIVRGLAASAPVEPHGQAARAHHLQRAGRGS*RLHEARAHGAVQPRVGHADV 122
P A A L+ S+ PH +A + H G GS LH H A QP G
Sbjct: 779 PYYTAAAMAAASPLSLSSKAPPHPHSALSSH-SPVGAGSHHLHHLHHHAAQQPPPGSHPG 837
Query: 121 TRQVPRQVNH 92
+ P+ H
Sbjct: 838 AQTQPQLSQH 847
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 24.6 bits (51), Expect = 1.5
Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Frame = -1
Query: 373 ARTARARQA-VHDVPTLVLADEQRVPDLALAGAAIVRGLAASAPVEPHGQAARAHHLQRA 197
A+T R A VH V + R ++ A ++A V P QAA +
Sbjct: 26 AQTCRNCAAPVHHGLNCVQNRQNRFANVVQVKATYANTVSAKT-VAPTPQAASHTAAGNS 84
Query: 196 GRGS*RLHEARAHGAVQPRVGHADVTRQVPRQVNHRYYRFEILYFVPLVP 47
G+ + +R A P HA+V Q PR + + +P+VP
Sbjct: 85 GQKKKKKSRSRFLSAATPAPTHANVEDQHPRDAS----KIAARLIIPIVP 130
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.8 bits (49), Expect = 2.6
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +2
Query: 20 SAEYSLALERYEWNKVQNFKSIVPMVHLTWNLARNIRVSDPRLH 151
+ EY+ LE K+ M W L +++R++DP H
Sbjct: 511 TTEYTTCLEFLILPKIATDLPSETMDVRGWKLPKDVRLADPTFH 554
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 3.4
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 113 LARNIRVSDPRLHRAMRTCLMQTLRAAAGTLQVVRARGLPVRFHGRARGEAS 268
L R R S + R RT +T AG L + RA R H R RG A+
Sbjct: 827 LERVQRKSAIAVARTFRTVRYETAVLLAGLLPICRAICEDTRVHSR-RGTAA 877
>EF519462-1|ABP73533.1| 147|Anopheles gambiae CTLMA2 protein.
Length = 147
Score = 23.0 bits (47), Expect = 4.5
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 32 SLALERYEWNKVQ 70
+LA+++YEWN Q
Sbjct: 120 ALAMDKYEWNDFQ 132
>EF519450-1|ABP73509.1| 151|Anopheles gambiae CTLMA2 protein.
Length = 151
Score = 23.0 bits (47), Expect = 4.5
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 32 SLALERYEWNKVQ 70
+LA+++YEWN Q
Sbjct: 124 ALAMDKYEWNDFQ 136
>AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein.
Length = 603
Score = 23.0 bits (47), Expect = 4.5
Identities = 7/34 (20%), Positives = 18/34 (52%)
Frame = +2
Query: 14 ADSAEYSLALERYEWNKVQNFKSIVPMVHLTWNL 115
ADS + ++LE ++W ++ ++ + N+
Sbjct: 350 ADSLKMKISLESHDWEAIEQIVRVLKYFYSATNI 383
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 22.6 bits (46), Expect = 6.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 410 GAPRGTGTLAVRGSHGAR 357
GAP G + +RG GAR
Sbjct: 743 GAPGAPGEMGLRGFEGAR 760
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 22.2 bits (45), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 240 STGALAARPRTIAAPASARSGTRCSSASTSVGTSC 344
ST A A P I +PA + S ST V SC
Sbjct: 440 STAADTAVPSGIKSPAFKQPAFSHSVCSTEVHRSC 474
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 22.2 bits (45), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 240 STGALAARPRTIAAPASARSGTRCSSASTSVGTSC 344
ST A A P I +PA + S ST V SC
Sbjct: 440 STAADTAVPSGIKSPAFKQPAFSHSVCSTEVHRSC 474
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,554
Number of Sequences: 2352
Number of extensions: 7704
Number of successful extensions: 64
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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