Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_B07
         (576 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...   131   6e-31
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...   131   6e-31
AF030197-1|AAB86609.1|  578|Drosophila melanogaster vesicular ac...    31   1.5  
AE014297-2573|AAF55587.2|  578|Drosophila melanogaster CG32848-P...    31   1.5  
BT022569-1|AAY54985.1|   87|Drosophila melanogaster IP06594p pro...    28   7.9  

>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score =  131 bits (317), Expect = 6e-31
 Identities = 57/77 (74%), Positives = 64/77 (83%)
 Frame = +2

Query: 344 EYKLGKRHLANMMGEDPETFTQKDVDRAIEYLFPSGIYDSAARPLMKPPEEVFPARKAAE 523
           E+++GKRHLANMMG D ETFTQ+D+D AI YLFPSG+YD  ARP MK PE VFPARKAAE
Sbjct: 79  EFQIGKRHLANMMGADAETFTQEDIDEAISYLFPSGLYDQKARPAMKSPEVVFPARKAAE 138

Query: 524 FDEAGMPHHLLFYTGKP 574
           FDE G P H +FYTGKP
Sbjct: 139 FDETGRPFHSMFYTGKP 155



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 17/28 (60%), Positives = 25/28 (89%)
 Frame = +1

Query: 259 KQKKISKAMKAYLERAKEHDEFMKRQQV 342
           +++++SKAM+AYL+RA EHDEFMK Q +
Sbjct: 51  QKQRVSKAMRAYLKRATEHDEFMKTQHL 78


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score =  131 bits (317), Expect = 6e-31
 Identities = 57/77 (74%), Positives = 64/77 (83%)
 Frame = +2

Query: 344 EYKLGKRHLANMMGEDPETFTQKDVDRAIEYLFPSGIYDSAARPLMKPPEEVFPARKAAE 523
           E+++GKRHLANMMG D ETFTQ+D+D AI YLFPSG+YD  ARP MK PE VFPARKAAE
Sbjct: 79  EFQIGKRHLANMMGADAETFTQEDIDEAISYLFPSGLYDQKARPAMKSPEVVFPARKAAE 138

Query: 524 FDEAGMPHHLLFYTGKP 574
           FDE G P H +FYTGKP
Sbjct: 139 FDETGRPFHSMFYTGKP 155



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 17/28 (60%), Positives = 25/28 (89%)
 Frame = +1

Query: 259 KQKKISKAMKAYLERAKEHDEFMKRQQV 342
           +++++SKAM+AYL+RA EHDEFMK Q +
Sbjct: 51  QKQRVSKAMRAYLKRATEHDEFMKTQHL 78


>AF030197-1|AAB86609.1|  578|Drosophila melanogaster vesicular
           acetylcholine transporterprotein.
          Length = 578

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/50 (32%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
 Frame = +3

Query: 357 VRDIWLI*WEKIQR-LSRKKMLIELLSIYSLVE---YMTLLPVLS*SLRK 494
           VR++  I WEKIQ  ++++++++ ++SI  L++   YM ++P++   LR+
Sbjct: 13  VREVKDIVWEKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYLRE 62


>AE014297-2573|AAF55587.2|  578|Drosophila melanogaster CG32848-PA
           protein.
          Length = 578

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/50 (32%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
 Frame = +3

Query: 357 VRDIWLI*WEKIQR-LSRKKMLIELLSIYSLVE---YMTLLPVLS*SLRK 494
           VR++  I WEKIQ  ++++++++ ++SI  L++   YM ++P++   LR+
Sbjct: 13  VREVKDIVWEKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYLRE 62


>BT022569-1|AAY54985.1|   87|Drosophila melanogaster IP06594p
           protein.
          Length = 87

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -3

Query: 520 GSFACW-KYFFRRLHERTGSRVIYSTR 443
           G+ A W ++  R LH RTGS  +Y+TR
Sbjct: 34  GAGATWFRFSTRLLHNRTGSSGVYATR 60


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,379,367
Number of Sequences: 53049
Number of extensions: 412266
Number of successful extensions: 1255
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)