Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_B06
         (148 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   1.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    19   5.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   5.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   7.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          18   9.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      18   9.4  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 29  KQRHSLKPRLLKSARNLHHELEAN 100
           + R SL PR+   +  +H E  AN
Sbjct: 730 QHRDSLSPRVENRSAIVHSEASAN 753


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 29  KQRHSLKPRLLKSARNLHHELEAN 100
           +QRH    +++   +  HH L  N
Sbjct: 793 QQRHQHAAQMIYGHQQSHHGLHIN 816


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +2

Query: 53  RLLKSARNLHHELEANDKQ 109
           +LLK ++ +  + E++DK+
Sbjct: 681 QLLKDSQYIREQTESDDKE 699


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 2    HEEQQYLLLKQRHSLKPR 55
            H   +Y + K+RH ++PR
Sbjct: 1073 HSTLEYKV-KERHLMRPR 1089


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 111 NCLSFASNSWCRFLADFSSLGFRL 40
           N +   S  W R + D  ++GF L
Sbjct: 627 NVVQIDSPVWGRHIYDGRAMGFPL 650


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 111 NCLSFASNSWCRFLADFSSLGFRL 40
           N +   S  W R + D  ++GF L
Sbjct: 627 NVVQIDSPVWGRHIYDGRAMGFPL 650


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,655
Number of Sequences: 438
Number of extensions: 281
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 29
effective length of database: 133,641
effective search space used:  2539179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)