Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_B03
         (525 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    24   3.6  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    24   3.6  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   4.7  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   8.3  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    23   8.3  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    23   8.3  

>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 141 LIITRTYQTFSSPKQHTKTKLIALDGLF 224
           L++  T Q  +  K HTKT L+ L G F
Sbjct: 186 LLLPITLQMLTFLKNHTKTALLYLWGRF 213


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 394 IHKLFNQPTHICLVETITF 338
           +H L +  TH+CL+E ++F
Sbjct: 244 VHDLNSLVTHLCLLEFLSF 262


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 389 VDTNEEYIANMTIEHPDDPYWY 454
           V TN+E   N T ++ +  YWY
Sbjct: 481 VMTNKELQLNPTTDYSETVYWY 502


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 293 FLTRDLIWMHWQNVLEGY 346
           FLTR  +W+ W+  L+ +
Sbjct: 384 FLTRGGLWLSWEEGLQHF 401


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 286 RGLPYQRSYLDALAECARRLLFQQDRCV 369
           +GL  ++S+L ++ +CA  L   + R V
Sbjct: 25  KGLTIEKSFLQSVHDCAEYLQVPKHRLV 52


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 286 RGLPYQRSYLDALAECARRLLFQQDRCV 369
           +GL  ++S+L ++ +CA  L   + R V
Sbjct: 25  KGLTIEKSFLQSVHDCAEYLQVPKHRLV 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,807
Number of Sequences: 2352
Number of extensions: 11180
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)