Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_B02
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    25   1.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.4  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              22   9.8  

>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -2

Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPL-PRI 114
           PTS +YP+    +++VN RL F LA L P+I
Sbjct: 78  PTSDLYPNDPKDRALVNHRLCFNLAFLYPQI 108


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 264 CPRLFVLPST*HVLSSISQSSNIQDVSLSRVCAV 163
           CP    + S  H LS IS +  + + SLSRV ++
Sbjct: 740 CPDKCSVISFSHSLSPISFNYTLSNSSLSRVLSI 773


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +3

Query: 30  RWQLQRSPSQRKCQLHQKTGKKVSKRWQNSRQRCQEE 140
           R Q Q+   Q++ Q HQ+  ++  ++ Q  +Q+ Q+E
Sbjct: 272 REQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQE 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,520
Number of Sequences: 2352
Number of extensions: 9205
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)