BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_B02
(489 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 3.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 3.1
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 4.0
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 5.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 5.3
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 7.0
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 7.0
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 7.0
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 7.0
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 21 7.0
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 9.3
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 9.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 9.3
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.3
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I L P PR +PP
Sbjct: 128 PPRPMGPWISIQEQIPRFRHIGPLTPFPRFIPP 160
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I L P PR +PP
Sbjct: 369 PPRPMGPWISIQEQIPRFRHIGPLTPFPRFIPP 401
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.8 bits (44), Expect = 4.0
Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 195 GCWNFEKYLKER-VKLKAK 248
GCWN + LK R +++ AK
Sbjct: 325 GCWNENRPLKRRNIEIVAK 343
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 5.3
Identities = 5/15 (33%), Positives = 11/15 (73%)
Frame = +3
Query: 372 IFGTGSEWWLLHMTH 416
++ +EW ++HM+H
Sbjct: 201 MYNNNTEWEIVHMSH 215
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 5.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 36 QLQRSPSQRKCQLHQKTGKKV 98
Q+Q+SP Q++ Q QK KV
Sbjct: 1097 QIQQSPHQQQQQQQQKILAKV 1117
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.0
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 125 PPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.0
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 125 PPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.0
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 125 PPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.0
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 125 PPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.0 bits (42), Expect = 7.0
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 54 SQRKCQLHQKTGKKVSK 104
+++ C+ KTGKK+S+
Sbjct: 271 NRKICEAFVKTGKKISE 287
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 131 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 163
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 139 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 171
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 139 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 171
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 131 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 163
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 131 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 163
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 131 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 163
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 131 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 163
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 131 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 163
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 131 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 163
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 131 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 163
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 131 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 163
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -3
Query: 91 LPVFWCNWHFLCDG 50
LP+F W F C G
Sbjct: 59 LPIFGTRWIFSCIG 72
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 347 PPRPMGPWISIQEQIPRFRYIGPSTPFPRFIPP 379
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 358 PPRPMGPWISIQEQIPRFRYIGPSTPFPRFIPP 390
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 364 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 396
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 364 PPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 396
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.6 bits (41), Expect = 9.3
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = -2
Query: 203 PTSRMYPSAGCVQSMVNLRLIFLLAPLPRILPP 105
P M P + + R I P PR +PP
Sbjct: 375 PPRSMEPWISMQEQIPRFRHIGPSTPFPRFIPP 407
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,519
Number of Sequences: 438
Number of extensions: 2478
Number of successful extensions: 27
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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