Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_A19
         (279 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   0.53 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   0.53 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   6.5  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    20   6.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   6.5  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    20   6.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   6.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   6.5  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    19   8.6  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       19   8.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 0.53
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 12  SARGLNIRQNLIQKNTNHFN 71
           S +GLNI  N+I+ N + +N
Sbjct: 355 SEKGLNILGNIIEGNADSYN 374


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 0.53
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 12  SARGLNIRQNLIQKNTNHFN 71
           S +GLNI  N+I+ N + +N
Sbjct: 355 SEKGLNILGNIIEGNADSYN 374


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 116 IFYGKIHLLSLHYVYTHSF 172
           ++Y  +   SL+YV T  F
Sbjct: 265 LYYSPVASTSLYYVNTEQF 283


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 130 NTSIVFTLCLYALFRVMRGI 189
           NT +  T CL A   V+RGI
Sbjct: 2   NTLVTVT-CLLAALTVVRGI 20


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 116 IFYGKIHLLSLHYVYTHSF 172
           ++Y  +   SL+YV T  F
Sbjct: 265 LYYSPVASTSLYYVNTEQF 283


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 130 NTSIVFTLCLYALFRVMRGI 189
           NT +  T CL A   V+RGI
Sbjct: 2   NTLVTVT-CLLAALTVVRGI 20


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 116 IFYGKIHLLSLHYVYTHSF 172
           ++Y  +   SL+YV T  F
Sbjct: 265 LYYSPVASTSLYYVNTEQF 283


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 206  HSRYSETARNGVA 244
            H+R  ETARN +A
Sbjct: 1128 HNRSRETARNRMA 1140


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -2

Query: 251 ALARPRYARFHYNANVKFRAQ 189
           A++ P Y  F Y    +F  Q
Sbjct: 3   AVSGPSYEAFSYGGQARFNNQ 23


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 95  VFLELKRLIKMICIFL 48
           VF+E+K+    I +FL
Sbjct: 456 VFVEMKKKADFIAVFL 471


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,099
Number of Sequences: 438
Number of extensions: 1206
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5369883
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)