Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A18
(243 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0438 + 3475017-3475484 84 1e-17
01_03_0108 - 12628711-12629178 84 1e-17
10_08_0470 - 18151326-18151769 58 1e-09
09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928... 58 1e-09
09_04_0554 + 18495073-18495175,18495794-18496032 58 1e-09
09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205... 58 1e-09
09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 58 1e-09
07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 58 1e-09
06_03_1149 + 28018932-28020529,28020989-28021067 58 1e-09
06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 58 1e-09
06_03_0944 + 26202053-26202229,26203788-26204047,26204145-262042... 58 1e-09
04_04_1238 + 31997671-31998816 58 1e-09
03_02_0429 + 8378819-8378921,8379098-8379282,8380054-8380120,838... 58 1e-09
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707... 58 1e-09
02_01_0464 - 3340642-3342015,3342403-3342405 58 1e-09
01_06_0033 + 25765300-25765758 58 1e-09
01_06_0031 + 25760878-25761342 58 1e-09
09_04_0556 + 18500324-18500426,18501501-18501697,18501826-185018... 56 3e-09
08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754 56 4e-09
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857... 56 4e-09
05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198 54 1e-08
08_01_0566 - 5028512-5029150 43 4e-05
07_03_0447 + 18301421-18301520,18301900-18302060 36 0.003
10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 36 0.006
08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137 35 0.008
10_08_0361 + 17207657-17207701,17208850-17209773 29 0.52
09_04_0560 - 18519024-18519145,18519330-18519435,18519671-185199... 28 0.91
10_02_0200 - 6672743-6673717,6676257-6676634,6677017-6677301,667... 27 2.1
03_06_0392 - 33583375-33583554,33583646-33584126,33584211-33584452 27 2.8
08_02_1362 + 26406710-26408530 26 4.9
08_02_0128 - 12848227-12848619,12848699-12848827,12849108-128492... 25 6.4
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 25 6.4
07_03_0620 + 20013974-20014253,20014393-20014756,20014944-20015103 25 8.5
>05_01_0438 + 3475017-3475484
Length = 155
Score = 84.2 bits (199), Expect = 1e-17
Identities = 43/79 (54%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVL 185
IFAGKQLEDGRTL+DYNIQKESTLHLV Y+ P LAVL
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVL 103
Query: 186 RYYKVDE-NGKIHRLRREC 239
++YKVD+ GK+ RLR+EC
Sbjct: 104 QFYKVDDATGKVTRLRKEC 122
>01_03_0108 - 12628711-12629178
Length = 155
Score = 84.2 bits (199), Expect = 1e-17
Identities = 43/79 (54%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVL 185
IFAGKQLEDGRTL+DYNIQKESTLHLV Y+ P LAVL
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVL 103
Query: 186 RYYKVDE-NGKIHRLRREC 239
++YKVD+ GK+ RLR+EC
Sbjct: 104 QFYKVDDATGKVTRLRKEC 122
>10_08_0470 - 18151326-18151769
Length = 147
Score = 57.6 bits (133), Expect = 1e-09
Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHL---VXXXXXXXXXXXXXNYSTPXXXXXXXXXXXL 176
IF G QL+DG TL Y IQ+ESTLHL + Y+TP L
Sbjct: 49 IFQGHQLDDGHTLIYYGIQEESTLHLLGRICGGGGGNKKRKKKAYATPKKGKHEHRKEEL 108
Query: 177 AVLRYYKVDE-NGKIHRLRREC 239
AVLR+Y+VD+ GK+ RLR C
Sbjct: 109 AVLRHYRVDDVMGKVERLRLMC 130
>09_06_0335 +
22391378-22391480,22391580-22391769,22392747-22392813,
22393177-22393206
Length = 129
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLV 70
>09_04_0554 + 18495073-18495175,18495794-18496032
Length = 113
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLV 70
>09_04_0354 +
16919133-16919235,16920145-16920355,16920478-16920544,
16920767-16920808
Length = 140
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLV 70
>09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028
Length = 153
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 38.7 bits (86), Expect = 6e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
I+AGKQL D +T DYNI+ S LHLV
Sbjct: 120 IYAGKQLADDKTAKDYNIEGGSVLHLV 146
>07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710
Length = 143
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLV 70
>06_03_1149 + 28018932-28020529,28020989-28021067
Length = 558
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLV 374
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 424 IFAGKQLEDGRTLADYNIQKESTLHLV 450
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 500 IFAGKQLEDGRTLADYNIQKESTLHLV 526
>06_03_1097 -
27570037-27570262,27570575-27570730,27570763-27570881,
27572154-27572236,27574991-27575041,27575218-27575674,
27576139-27576228,27576672-27576701
Length = 403
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 84 IFAGKQLEDGRTLADYNIQKESTLHLV 110
Score = 54.8 bits (126), Expect = 9e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFA KQLEDGRTL+DYNIQKESTLHLV
Sbjct: 160 IFADKQLEDGRTLADYNIQKESTLHLV 186
>06_03_0944 +
26202053-26202229,26203788-26204047,26204145-26204245,
26204512-26204584,26205482-26205581
Length = 236
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 72 IFAGKQLEDGRTLADYNIQKESTLHLV 98
Score = 38.7 bits (86), Expect = 6e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
I+AGKQL D +T DYNI+ S LHLV
Sbjct: 148 IYAGKQLADDKTAKDYNIEGGSVLHLV 174
>04_04_1238 + 31997671-31998816
Length = 381
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLV 374
>03_02_0429 +
8378819-8378921,8379098-8379282,8380054-8380120,
8380516-8380544,8380739-8380774
Length = 139
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLV 70
>03_02_0281 -
7069847-7069876,7070152-7070218,7071320-7071445,
7071727-7071916,7072008-7072110
Length = 171
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLV 70
>02_01_0464 - 3340642-3342015,3342403-3342405
Length = 458
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 45 IFAGKQLEDGRTLADYNIQKESTLHLV 71
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 121 IFAGKQLEDGRTLADYNIQKESTLHLV 147
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 197 IFAGKQLEDGRTLADYNIQKESTLHLV 223
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 273 IFAGKQLEDGRTLADYNIQKESTLHLV 299
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 349 IFAGKQLEDGRTLADYNIQKESTLHLV 375
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 425 IFAGKQLEDGRTLADYNIQKESTLHLV 451
>01_06_0033 + 25765300-25765758
Length = 152
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTL 77
++ GKQL D +T+ +Y+I+ S L
Sbjct: 115 VYGGKQLADDKTVHEYDIEAGSVL 138
>01_06_0031 + 25760878-25761342
Length = 154
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 34.7 bits (76), Expect = 0.011
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
I+ GKQL D +T DY I+ S LHLV
Sbjct: 120 IYGGKQLADDKTAHDYKIEAGSVLHLV 146
>09_04_0556 +
18500324-18500426,18501501-18501697,18501826-18501892,
18502300-18502370
Length = 145
Score = 56.4 bits (130), Expect = 3e-09
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQL+DGRTL+DYNIQKESTLHLV
Sbjct: 44 IFAGKQLDDGRTLADYNIQKESTLHLV 70
>08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754
Length = 203
Score = 56.0 bits (129), Expect = 4e-09
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLE+GRTL+DYNIQKESTLHLV
Sbjct: 157 IFAGKQLEEGRTLADYNIQKESTLHLV 183
>05_03_0115 -
8544590-8544958,8545408-8545503,8561954-8562505,
8576247-8576312,8576623-8576694,8576967-8577082,
8577743-8577838,8578498-8578765
Length = 544
Score = 56.0 bits (129), Expect = 4e-09
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQL+DGRTL+DYNIQKESTLHLV
Sbjct: 435 IFAGKQLKDGRTLADYNIQKESTLHLV 461
Score = 53.2 bits (122), Expect = 3e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHL 83
IFAGKQLEDGRTL+ YNIQKESTLHL
Sbjct: 511 IFAGKQLEDGRTLAGYNIQKESTLHL 536
>05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198
Length = 106
Score = 54.4 bits (125), Expect = 1e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
IFAGKQLEDG TL+DYNIQKESTLHLV
Sbjct: 60 IFAGKQLEDGCTLADYNIQKESTLHLV 86
>08_01_0566 - 5028512-5029150
Length = 212
Score = 42.7 bits (96), Expect = 4e-05
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHL 83
+FAG+ LEDGRTL++Y I+KE+ LHL
Sbjct: 44 MFAGRHLEDGRTLAEYGIKKEANLHL 69
>07_03_0447 + 18301421-18301520,18301900-18302060
Length = 86
Score = 36.3 bits (80), Expect = 0.003
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 12 AGKQLEDGRTLSDYNIQKESTLHL 83
AG+QL+D RTL+DY IQ E TL L
Sbjct: 45 AGRQLDDRRTLADYGIQTEHTLRL 68
>10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364
Length = 333
Score = 35.5 bits (78), Expect = 0.006
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHL 83
+F+G +L D RTL+ Y I++ESTL+L
Sbjct: 221 VFSGMELADDRTLASYGIEEESTLYL 246
Score = 29.9 bits (64), Expect = 0.30
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHL 83
IF G+QL+DG T++ I+K S L+L
Sbjct: 113 IFEGRQLDDGDTVASCGIRKHSYLNL 138
>08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137
Length = 174
Score = 35.1 bits (77), Expect = 0.008
Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
Frame = +3
Query: 18 KQLEDG-RTLSDYNIQKESTLHLV 86
KQL+DG TL+DY+I ESTLHLV
Sbjct: 142 KQLDDGGSTLADYDIHDESTLHLV 165
>10_08_0361 + 17207657-17207701,17208850-17209773
Length = 322
Score = 29.1 bits (62), Expect = 0.52
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
++AG+QLED + LS +++ + T H++
Sbjct: 130 MYAGQQLEDNQLLSQCDLRNDQTFHVL 156
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 9 FAGKQLEDGRTLSDYNIQKESTLHL 83
FAG L++ L+DYNI S++ L
Sbjct: 56 FAGMHLKNEDKLADYNIMTNSSVDL 80
>09_04_0560 -
18519024-18519145,18519330-18519435,18519671-18519907,
18521371-18521810,18523215-18525012
Length = 900
Score = 28.3 bits (60), Expect = 0.91
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
++AG+QL L+D + +STLHL+
Sbjct: 121 VYAGRQLAPETALADLRLPPDSTLHLL 147
>10_02_0200 -
6672743-6673717,6676257-6676634,6677017-6677301,
6677420-6677570,6677696-6677930,6678689-6678764
Length = 699
Score = 27.1 bits (57), Expect = 2.1
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 6 IFAGKQLEDGRTLSDYNIQKESTLHLV 86
++AG+QL+D + LS + + + LH++
Sbjct: 471 MYAGRQLDDRQILSHFGLSDDQILHVL 497
>03_06_0392 - 33583375-33583554,33583646-33584126,33584211-33584452
Length = 300
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 9 FAGKQLEDG-RTLSDYNIQKESTLHL 83
FAG+ L+D RTL+DY ++ +S + L
Sbjct: 46 FAGRCLDDDHRTLADYGVRHDSVVFL 71
>08_02_1362 + 26406710-26408530
Length = 606
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 102 HRAGGALSGASTPSGYCNQRGFDHL 28
H GG +STPSG C + HL
Sbjct: 395 HDGGGGGGASSTPSGRCMREILTHL 419
>08_02_0128 -
12848227-12848619,12848699-12848827,12849108-12849279,
12849336-12849488,12850017-12850271,12850846-12851000,
12853319-12853456,12853545-12853715,12853878-12854063,
12854169-12854290,12855617-12855752,12856108-12856203,
12856294-12856356,12856846-12856993,12857324-12857514,
12857916-12857989,12858039-12858171,12858299-12858460,
12861649-12861745,12861866-12861962,12863994-12864141
Length = 1072
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 230 PQPVDLTVLIDLVVPEDS 177
P P+ TVL+D +VPE+S
Sbjct: 554 PSPLTPTVLLDGIVPEES 571
>06_03_0924 -
25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 12 AGKQLEDGRTLSDYNIQKESTLHLV 86
+GK+L+D +L+ N++ S LH+V
Sbjct: 682 SGKELQDDISLAMQNVRPNSILHVV 706
>07_03_0620 + 20013974-20014253,20014393-20014756,20014944-20015103
Length = 267
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 93 GGALSGASTPSGYCNQRGFDHLP-TVYR 13
G SGA++P+G+ G HLP T +R
Sbjct: 83 GEVRSGATSPTGHAIGAGGSHLPFTAFR 110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.308 0.120 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,735,479
Number of Sequences: 37544
Number of extensions: 72387
Number of successful extensions: 172
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 14,793,348
effective HSP length: 59
effective length of database: 12,578,252
effective search space used: 264143292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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