Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A16
(324 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 32 0.082
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 32 0.082
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 32 0.082
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 32 0.082
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 31 0.25
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 0.33
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 0.58
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 29 0.77
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 29 0.77
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 29 0.77
AL132898-20|CAC14415.2| 243|Caenorhabditis elegans Hypothetical... 29 1.0
AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical... 29 1.0
AF078785-4|AAC27089.3| 609|Caenorhabditis elegans Hypothetical ... 29 1.0
AF100656-6|AAF99961.1| 240|Caenorhabditis elegans Hypothetical ... 28 1.8
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 28 1.8
U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore co... 27 2.3
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 27 2.3
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 27 3.1
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 3.1
AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical... 27 3.1
U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical pr... 27 4.1
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 26 5.4
U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2... 26 5.4
U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2... 26 5.4
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 26 5.4
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 26 5.4
AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility... 26 5.4
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z47808-4|CAA87772.1| 235|Caenorhabditis elegans Hypothetical pr... 26 7.2
U88184-1|AAK31517.1| 476|Caenorhabditis elegans C-type lectin p... 26 7.2
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 26 7.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 26 7.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 26 7.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 26 7.2
AC024757-1|AAF59450.3| 490|Caenorhabditis elegans Hypothetical ... 26 7.2
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 26 7.2
Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z81521-3|CAB04225.1| 353|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z81076-6|CAB03054.1| 387|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 25 9.5
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 25 9.5
Z34802-1|CAA84336.1| 531|Caenorhabditis elegans Hypothetical pr... 25 9.5
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 25 9.5
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 25 9.5
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 25 9.5
U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2... 25 9.5
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 25 9.5
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 25 9.5
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 25 9.5
AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical ... 25 9.5
AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical ... 25 9.5
AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical ... 25 9.5
AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical ... 25 9.5
AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical ... 25 9.5
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 32.3 bits (70), Expect = 0.082
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 188 PCRRHLLPASTPYWTPMVPNAPSTTPAMMSTDLTLLFARTP 310
P +H++ A P W+ P+ PS P T T +F +TP
Sbjct: 481 PFNQHIITAGEPTWSSQQPHQPSEVP----TQTTFIFPQTP 517
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 32.3 bits (70), Expect = 0.082
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 188 PCRRHLLPASTPYWTPMVPNAPSTTPAMMSTDLTLLFARTP 310
P +H++ A P W+ P+ PS P T T +F +TP
Sbjct: 481 PFNQHIITAGEPTWSSQQPHQPSEVP----TQTTFIFPQTP 517
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 32.3 bits (70), Expect = 0.082
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 188 PCRRHLLPASTPYWTPMVPNAPSTTPAMMSTDLTLLFARTP 310
P +H++ A P W+ P+ PS P T T +F +TP
Sbjct: 481 PFNQHIITAGEPTWSSQQPHQPSEVP----TQTTFIFPQTP 517
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 32.3 bits (70), Expect = 0.082
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 188 PCRRHLLPASTPYWTPMVPNAPSTTPAMMSTDLTLLFARTP 310
P +H++ A P W+ P+ PS P T T +F +TP
Sbjct: 481 PFNQHIITAGEPTWSSQQPHQPSEVP----TQTTFIFPQTP 517
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 121 TTPASRTTSPNPTPVTSRANPRPVSEAPVT 210
TTP + T +P P R + RPV++AP T
Sbjct: 324 TTPLATTRAPLPPSPPPRTSKRPVTQAPTT 353
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 70 RGPRVP*HMCP*FEQTMTTPASRTTSPNPTPVTSRANPRPVSEAPVT 210
R + P P + TT TT+P PTP +R P+ + AP T
Sbjct: 341 RTSKRPVTQAPTTPRATTTRRPTTTTPRPTPRRTR-RPKTTTAAPTT 386
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.3 bits (65), Expect = 0.33
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 112 QTMTTPASRTTSPNPTPVTSRANPRPVSEAPVT 210
+T TTP + TT TP T+ P + P T
Sbjct: 138 ETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTT 170
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +1
Query: 115 TMTTPASRTTSPNPT---PVTSRANPRPVSEAPVT 210
T TTP + TT+P T P T+ P + AP T
Sbjct: 164 TTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTT 198
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = +1
Query: 112 QTMTTPASRTTSPNPT---PVTSRANPRPVSEAPVT 210
+T TTP + TT+P T P T+ P + P T
Sbjct: 149 ETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 184
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +1
Query: 115 TMTTPASRTTSPNPT---PVTSRANPRPVSEAPVT 210
T TTP + TT+P T P T+ P + P T
Sbjct: 157 TTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 191
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +1
Query: 115 TMTTPASRTTSPNPT---PVTSRANPRPVSEAPVT 210
T TTP + TT+P T P T+ P + P T
Sbjct: 178 TTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTT 212
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +1
Query: 115 TMTTPASRTTSPNPT---PVTSRANPRPVSEAPVT 210
T TTP + TT+P T P T+ P + P T
Sbjct: 185 TTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTT 219
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 112 QTMTTPASRTTSPNPTPVTSRANPRPVSEAPVT 210
QT T P + TT+P TP T+ + A T
Sbjct: 264 QTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTT 296
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 115 TMTTPASRTTSPNP-TPVTSRANPRPVSEAPVT 210
T TT S TT+ P TP T+ P + P T
Sbjct: 65 TSTTTTSTTTTTTPTTPTTTTTTPTTTTTTPTT 97
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +1
Query: 115 TMTTPASRTTSPNP---TPVTSRANPRPVSEAPVT 210
T TTP + TT+P TP T+ P + P T
Sbjct: 171 TTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTT 205
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVSEAPVT 210
T TTP + TT+ TP T+ P + P T
Sbjct: 74 TTTTPTTPTTTTT-TPTTTTTTPTTTTTTPTT 104
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.5 bits (63), Expect = 0.58
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVSEAPVT 210
T TTP + TT+P TP T+ P + T
Sbjct: 272 TTTTPTTTTTTPTTTPTTTTTTPTTTTTESTT 303
Score = 29.1 bits (62), Expect = 0.77
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVSEAPVT 210
T TTP + TT+P T T P + P T
Sbjct: 265 TTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTT 296
Score = 29.1 bits (62), Expect = 0.77
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVSEAPVT 210
T TTP + TT T TS P + AP T
Sbjct: 290 TTTTPTTTTTESTTTETTSTTTPTTTTTAPTT 321
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 29.1 bits (62), Expect = 0.77
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 109 EQTMTTPASRTTSPNPTPVTSRANPRPVSEAPVT 210
+ T TT A+ TT+ P P T+ P + P T
Sbjct: 210 QPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTT 243
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 29.1 bits (62), Expect = 0.77
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 109 EQTMTTPASRTTSPNPTPVTSRANPRPVSEAPVT 210
+ T TT A+ TT+ P P T+ P + P T
Sbjct: 206 QPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTT 239
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 29.1 bits (62), Expect = 0.77
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 109 EQTMTTPASRTTSPNPTPVTSRANPRPVSEAPVT 210
+ T TT A+ TT+ P P T+ P + P T
Sbjct: 149 QPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTT 182
>AL132898-20|CAC14415.2| 243|Caenorhabditis elegans Hypothetical
protein Y59A8B.19 protein.
Length = 243
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 309 GVLANNSVKSVDIIAGVVDGAFGTIGVQ*GVLAG 208
G +A + S+ + GVVDG GT+G G L G
Sbjct: 72 GGVAGGATGSLGAVTGVVDGVTGTVGDLTGGLGG 105
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 270 IAGVVDGAFGTIGVQ*GVLAG 208
+ GVVDG GT+G GVL G
Sbjct: 195 VTGVVDGVTGTVGDLTGVLGG 215
>AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical
protein Y59A8B.26 protein.
Length = 258
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 309 GVLANNSVKSVDIIAGVVDGAFGTIGVQ*GVLAG 208
G +A + S+ + GVVDG GT+G G L G
Sbjct: 72 GGVAGGATGSLGAVTGVVDGVTGTVGDLTGGLGG 105
>AF078785-4|AAC27089.3| 609|Caenorhabditis elegans Hypothetical
protein C04E12.4 protein.
Length = 609
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 115 TMTTPASR-TTSPNPTPVTSRANPRPVSEAPVTGQYSLL 228
T TTP S TT + TP+T + +S P+T Y ++
Sbjct: 411 TTTTPGSIVTTKSSTTPITEPDHQPDISTTPLTESYEII 449
>AF100656-6|AAF99961.1| 240|Caenorhabditis elegans Hypothetical
protein F49F1.7 protein.
Length = 240
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRP 189
T TT A++TT+P+ T T+ P+P
Sbjct: 177 TETTKATKTTTPSTTVKTTTTKPKP 201
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 121 TTPASRTTSPNPTPVTSRANPRPVSEAPVTGQYS--LLDADGTK 246
TT RTT+ P P T+ P + P+T YS ++D++ TK
Sbjct: 273 TTTVPRTTTTVP-PTTTTVPPTTTTVPPITTTYSEDIIDSEVTK 315
>U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore
complex protein protein12 protein.
Length = 1847
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2
Query: 173 LEVTGVGFGDVVREAGV 123
LEV+G+GFG+ VRE V
Sbjct: 518 LEVSGIGFGETVRETFV 534
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 127 PASRTTSPNPTPVTSRANPRPVSEAP 204
P+S+ T P P P S A P P S P
Sbjct: 172 PSSQPTMPTPYPTGSGAAPYPPSSTP 197
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 124 TPASRTTSPNPTPVTSRANPRPVSEAP 204
T A+ T+ P P T++A P P ++AP
Sbjct: 165 TTAAEPTTEAPPPPTTKAPPPPTTKAP 191
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 109 EQTMTTPASRTTSPNPTPVTSRANPRPVSEAP 204
E T P TT P P T++A P P ++AP
Sbjct: 169 EPTTEAPPPPTTKAPPPP-TTKAPPPPTTKAP 199
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +1
Query: 115 TMTTPASRTTSPNPT---PVTSRANPRPVSEAPVT 210
T TTP + TT+P T P T+ P + P T
Sbjct: 91 TTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 125
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +1
Query: 115 TMTTPASRTTSPNPT---PVTSRANPRPVSEAPVT 210
T TTP + TT+P T P T+ P + P T
Sbjct: 98 TTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 132
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 97 CP*FEQTMTTPASRTTSPNPTPVTSRANP 183
CP + T P+S T++P P P S A P
Sbjct: 276 CPQRQDDRTPPSSGTSAPQPPPRGSTAAP 304
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 121 TTPASRTT-SPNPTPVTSRANPRPVSEAPVTGQ 216
TTP S T SP+ T TS A+P ++ + T Q
Sbjct: 506 TTPKSTVTASPSTTGATSTASPSTITSSAPTSQ 538
>AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical
protein W10G11.6 protein.
Length = 426
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPV 192
T TTPA+ TT+ P V + A P PV
Sbjct: 31 TTTTPAAVTTTAAPPVVVTTAAPPPV 56
>U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical
protein F18E9.3 protein.
Length = 378
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 127 PASRTTSPNPTPVTSRANPR 186
PAS TT+P PT T N R
Sbjct: 221 PASTTTTPTPTTTTQSPNTR 240
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVSE--APVTGQYS 222
+MT+P TSP+ +P + A PVS +P + YS
Sbjct: 1583 SMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYS 1620
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 121 TTPASRTTSPNPTPVTSRANPRPVSEAPVTGQYS 222
T+P+ TSP+ +P + +P S +P + YS
Sbjct: 1615 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1648
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 121 TTPASRTTSPNPTPVTSRANPRPVSEAPVTGQYS 222
T+P+ TSP+ +P + +P S +P + YS
Sbjct: 1622 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655
>U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2,
isoform c protein.
Length = 233
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 133 SRTTSPNPTPVTSRANPRPVSEAPVTGQYS 222
S PNP+ +A PR + + PV G+ S
Sbjct: 21 SHQLQPNPSATMYQATPRDMGKPPVRGKTS 50
>U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2,
isoform a protein.
Length = 235
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 133 SRTTSPNPTPVTSRANPRPVSEAPVTGQYS 222
S PNP+ +A PR + + PV G+ S
Sbjct: 21 SHQLQPNPSATMYQATPRDMGKPPVRGKTS 50
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVSE--APVTGQYS 222
+MT+P TSP+ +P + A PVS +P + YS
Sbjct: 1590 SMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYS 1627
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 121 TTPASRTTSPNPTPVTSRANPRPVSEAPVTGQYS 222
T+P+ TSP+ +P + +P S +P + YS
Sbjct: 1622 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 121 TTPASRTTSPNPTPVTSRANPRPVSEAPVTGQYS 222
T+P+ TSP+ +P + +P S +P + YS
Sbjct: 1629 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1662
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 142 TSPNPTPVTSRANPRPVSEAP 204
TSP+ T + +PRP+S AP
Sbjct: 509 TSPSETQKKRKEDPRPISSAP 529
>AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility
group protein 1.2 protein.
Length = 235
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 133 SRTTSPNPTPVTSRANPRPVSEAPVTGQYS 222
S PNP+ +A PR + + PV G+ S
Sbjct: 21 SHQLQPNPSATMYQATPRDMGKPPVRGKTS 50
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 127 PASRTTSPNPTPVTSRANPRPVS 195
PAS TSP P P R +P V+
Sbjct: 364 PASAATSPAPAPEAPRRDPNNVT 386
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVSEAP 204
T T PAS+ +P PV +R+ P P AP
Sbjct: 302 TKTAPASK--APTRAPVPARSAPAPPRGAP 329
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 127 PASRTTSPNPTPVTSRANPRPVS 195
PAS TSP P P R +P V+
Sbjct: 364 PASAATSPAPAPEAPRRDPNNVT 386
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVSEAP 204
T T PAS+ +P PV +R+ P P AP
Sbjct: 302 TKTAPASK--APTRAPVPARSAPAPPRGAP 329
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 127 PASRTTSPNPTPVTSRANPRPVS 195
PAS TSP P P R +P V+
Sbjct: 364 PASAATSPAPAPEAPRRDPNNVT 386
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVSEAP 204
T T PAS+ +P PV +R+ P P AP
Sbjct: 302 TKTAPASK--APTRAPVPARSAPAPPRGAP 329
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 305 SLRTTALNPLTSSPA*STVRLVPSASNR 222
S +T++ NP+TS+P ++ +P NR
Sbjct: 99 SCQTSSCNPMTSTPIPASQSCLPECENR 126
>Z47808-4|CAA87772.1| 235|Caenorhabditis elegans Hypothetical
protein D2013.6 protein.
Length = 235
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 139 TTSPNPTP-VTSRANPRPVSEAPVTGQYSLLDADGTKRTVD 258
+++P P P + P P E V GQ+ A G+ T D
Sbjct: 189 SSAPPPYPGIGPERGPHPTEELHVAGQFEAPPAYGSGETAD 229
>U88184-1|AAK31517.1| 476|Caenorhabditis elegans C-type lectin
protein 19 protein.
Length = 476
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 157 LGSATSYEKLE*SSSARTKGTCATEHVGHGYHRCEHYDE 41
LGSA Y E KG C T + GY H ++
Sbjct: 192 LGSAEKYSGFESEGLNSEKGRCVTVNTTSGYWSSTHCEK 230
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 40 VRRSARS-DGSRGPRVP*HMCP*FEQTMTTPASRTTSPNPTPVTSRANPR 186
+R + +S D R PR P T T P S ++SP PTP+ R +PR
Sbjct: 153 IRDAGQSPDPKRAPRYS--PPPSSTPTPTPPPSSSSSPTPTPL--RRSPR 198
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/66 (28%), Positives = 23/66 (34%)
Frame = +1
Query: 7 GQPQT*RNGS*VRRSARSDGSRGPRVP*HMCP*FEQTMTTPASRTTSPNPTPVTSRANPR 186
GQ Q +NG +R A GS P P P + + P P P T P
Sbjct: 216 GQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 275
Query: 187 PVSEAP 204
P P
Sbjct: 276 PTGSPP 281
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/66 (28%), Positives = 23/66 (34%)
Frame = +1
Query: 7 GQPQT*RNGS*VRRSARSDGSRGPRVP*HMCP*FEQTMTTPASRTTSPNPTPVTSRANPR 186
GQ Q +NG +R A GS P P P + + P P P T P
Sbjct: 237 GQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 296
Query: 187 PVSEAP 204
P P
Sbjct: 297 PTGSPP 302
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/66 (28%), Positives = 23/66 (34%)
Frame = +1
Query: 7 GQPQT*RNGS*VRRSARSDGSRGPRVP*HMCP*FEQTMTTPASRTTSPNPTPVTSRANPR 186
GQ Q +NG +R A GS P P P + + P P P T P
Sbjct: 222 GQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 281
Query: 187 PVSEAP 204
P P
Sbjct: 282 PTGSPP 287
>AC024757-1|AAF59450.3| 490|Caenorhabditis elegans Hypothetical
protein Y37E11AL.5 protein.
Length = 490
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 193 TRVSDWLLKSPVLGSATSYEKLE*SSSARTKGTCATEHVGHGYHRCE 53
TR+S ++ + + T E + TKG EH HGY +CE
Sbjct: 103 TRMSIYMRFPDIYDNYTCVYYDEEEKAWSTKGIRRIEHSYHGYVKCE 149
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVSEAPVTGQYS 222
T+T S +TS P+P S A S PVT S
Sbjct: 627 TVTQAPSSSTSMGPSPSQSTAGSTMTSAPPVTSSSS 662
>Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical
protein K10C3.2 protein.
Length = 174
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 100 P*FEQTMTTPASRTTSPNPTPVTSRANPRPVSE 198
P Q PA+ T SP+ +P++ + N RP S+
Sbjct: 92 PVVAQRSPAPAATTPSPSASPISQQTN-RPSSD 123
>Z81521-3|CAB04225.1| 353|Caenorhabditis elegans Hypothetical
protein F32A11.3 protein.
Length = 353
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/54 (25%), Positives = 20/54 (37%)
Frame = +1
Query: 109 EQTMTTPASRTTSPNPTPVTSRANPRPVSEAPVTGQYSLLDADGTKRTVDYAGD 270
EQ P +P TP+ + + P EAPV Y G + + D
Sbjct: 178 EQEEEVPEIHVAAPVTTPIPTYSAPPVNYEAPVFNNYYSKGVSGPSEYIGMSND 231
>Z81076-6|CAB03054.1| 387|Caenorhabditis elegans Hypothetical
protein F35C5.5b protein.
Length = 387
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 182 RDPCRRHLLPASTPYWTPMVPNAPSTTPAMMSTDLTLLF 298
+ P L+P + W P P STT A+++ + F
Sbjct: 319 QQPVGHALVPLNDSLWNPGFPTQSSTTTAVLNQQSSSAF 357
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -2
Query: 275 TSSPA*STVRLVPSASNREYWPVTGASDTGLGLALEVTGV 156
TSS T + + ++ W V+ AS TG+ + +T +
Sbjct: 2263 TSSTGTPTTNMTLNCNSASQWVVSSASGTGIPVGTVITSI 2302
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -2
Query: 275 TSSPA*STVRLVPSASNREYWPVTGASDTGLGLALEVTGV 156
TSS T + + ++ W V+ AS TG+ + +T +
Sbjct: 2263 TSSTGTPTTNMTLNCNSASQWVVSSASGTGIPVGTVITSI 2302
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -2
Query: 275 TSSPA*STVRLVPSASNREYWPVTGASDTGLGLALEVTGV 156
TSS T + + ++ W V+ AS TG+ + +T +
Sbjct: 2263 TSSTGTPTTNMTLNCNSASQWVVSSASGTGIPVGTVITSI 2302
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -2
Query: 275 TSSPA*STVRLVPSASNREYWPVTGASDTGLGLALEVTGV 156
TSS T + + ++ W V+ AS TG+ + +T +
Sbjct: 2263 TSSTGTPTTNMTLNCNSASQWVVSSASGTGIPVGTVITSI 2302
>Z34802-1|CAA84336.1| 531|Caenorhabditis elegans Hypothetical
protein M88.1 protein.
Length = 531
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 138 YDVAEPNTGDFKSQSETRVG 197
+D A+P TG+FK SET G
Sbjct: 280 FDSAKPLTGEFKKISETGKG 299
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVS 195
T TT S T + P P T+ + +PV+
Sbjct: 632 TTTTTTSTTATTTPQPTTTTTSEKPVT 658
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVS 195
T TT S T + P P T+ + +PV+
Sbjct: 632 TTTTTTSTTATTTPQPTTTTTSEKPVT 658
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +1
Query: 115 TMTTPASRT--TSPNPTPVTSRANP-RPVSEAPVT 210
TM+ P + T T+P P P T+ P P + P T
Sbjct: 477 TMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTT 511
>U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2,
isoform b protein.
Length = 234
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 148 PNPTPVTSRANPRPVSEAPVTGQYS 222
PNP+ +A PR + + PV G+ S
Sbjct: 25 PNPSATMYQATPRDMGKPPVRGKTS 49
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/51 (25%), Positives = 20/51 (39%)
Frame = -3
Query: 193 TRVSDWLLKSPVLGSATSYEKLE*SSSARTKGTCATEHVGHGYHRCEHYDE 41
TR K+ +A S+ + + C + G GY+ CE DE
Sbjct: 362 TRQEKCATKTQCASNALSFNDYDRCGEPIQRCQCLNGYKGDGYNNCEDVDE 412
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/51 (25%), Positives = 20/51 (39%)
Frame = -3
Query: 193 TRVSDWLLKSPVLGSATSYEKLE*SSSARTKGTCATEHVGHGYHRCEHYDE 41
TR K+ +A S+ + + C + G GY+ CE DE
Sbjct: 362 TRQEKCATKTQCASNALSFNDYDRCGEPIQRCQCLNGYKGDGYNNCEDVDE 412
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +1
Query: 112 QTMTTPASRTTSPNPTPVTSRANPRPVSEAPVTGQYSLLDA 234
+ + PAS +P P P + N P + G++ DA
Sbjct: 594 EAKSAPASAAPAPAPAPAPTTTNGFPANFNDAFGEFDKTDA 634
>AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical
protein Y106G6H.1 protein.
Length = 453
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 115 TMTTPASRTTSPNPTPVTSRANPRPVSEAPVTG 213
T TTPA+ TT+ +PT V +++ +G
Sbjct: 99 TPTTPAAPTTTADPTTVADDTTTAGATDSSTSG 131
>AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical
protein Y17G7B.2c protein.
Length = 462
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 148 PNPTPVTSRANPRPVSEAPVTGQYSLLDAD 237
P P T A+ R +EAPVTG+ L AD
Sbjct: 211 PIEGPKTRGASKRRHAEAPVTGKKQKLAAD 240
>AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical
protein Y17G7B.2b protein.
Length = 572
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 148 PNPTPVTSRANPRPVSEAPVTGQYSLLDAD 237
P P T A+ R +EAPVTG+ L AD
Sbjct: 213 PIEGPKTRGASKRRHAEAPVTGKKQKLAAD 242
>AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical
protein Y17G7B.2a protein.
Length = 570
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 148 PNPTPVTSRANPRPVSEAPVTGQYSLLDAD 237
P P T A+ R +EAPVTG+ L AD
Sbjct: 211 PIEGPKTRGASKRRHAEAPVTGKKQKLAAD 240
>AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical
protein 2RSSE.1 protein.
Length = 343
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 145 SPNPTPVTSRANPR--PVSEAPVTGQYSLLD-ADGTKRTVDYAGDD 273
SP PTP TS+ PR V A Q++L D KR+V A D
Sbjct: 285 SPEPTPTTSKP-PRGNGVGRAGSLKQHALTQTTDHPKRSVSIAAKD 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,738,259
Number of Sequences: 27780
Number of extensions: 133498
Number of successful extensions: 870
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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