Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_A14
         (494 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023838-1|AAZ86759.1|  455|Drosophila melanogaster LD13915p pro...    29   4.6  
AE013599-2015|AAF58167.1|  441|Drosophila melanogaster CG8090-PA...    29   4.6  
AE014298-762|AAF46052.1|  643|Drosophila melanogaster CG17758-PA...    28   8.0  

>BT023838-1|AAZ86759.1|  455|Drosophila melanogaster LD13915p
           protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 188 LYFTLAVRPRYVCHCVIHYVIF 253
           L+ T AV P Y+C+ VIH + F
Sbjct: 83  LFMTTAVIPIYICYSVIHSISF 104


>AE013599-2015|AAF58167.1|  441|Drosophila melanogaster CG8090-PA
           protein.
          Length = 441

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 188 LYFTLAVRPRYVCHCVIHYVIF 253
           L+ T AV P Y+C+ VIH + F
Sbjct: 69  LFMTTAVIPIYICYSVIHSISF 90


>AE014298-762|AAF46052.1|  643|Drosophila melanogaster CG17758-PA
           protein.
          Length = 643

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +2

Query: 140 LF*NILILKVTQT*MKLYFTLAVRPRYVCHCVIHYVI---FLYGTLII 274
           LF  ILIL +T   + ++F L  RP +V   V    I    +YGT  I
Sbjct: 332 LFVGILILVLTIISLIIFFVLISRPEFVAMAVTEVTICELLIYGTATI 379


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,527,785
Number of Sequences: 53049
Number of extensions: 363335
Number of successful extensions: 661
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)