Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_A12
         (387 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058385-1|AAL13614.1|  323|Drosophila melanogaster GH14710p pro...    27   6.4  
AE014297-1948|AAN13631.1|  323|Drosophila melanogaster CG4196-PC...    27   6.4  
AE014297-1947|AAN13630.1|  323|Drosophila melanogaster CG4196-PB...    27   6.4  

>AY058385-1|AAL13614.1|  323|Drosophila melanogaster GH14710p
           protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
 Frame = +2

Query: 161 AHLSRDTETGRLRPKK--ASEYTLRLIAE 241
           A L  D E+GR RP+K  A+ +T+R++A+
Sbjct: 211 AALVNDAESGRRRPQKRGATYFTMRILAQ 239


>AE014297-1948|AAN13631.1|  323|Drosophila melanogaster CG4196-PC,
           isoform C protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
 Frame = +2

Query: 161 AHLSRDTETGRLRPKK--ASEYTLRLIAE 241
           A L  D E+GR RP+K  A+ +T+R++A+
Sbjct: 211 AALVNDAESGRRRPQKRGATYFTMRILAQ 239


>AE014297-1947|AAN13630.1|  323|Drosophila melanogaster CG4196-PB,
           isoform B protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
 Frame = +2

Query: 161 AHLSRDTETGRLRPKK--ASEYTLRLIAE 241
           A L  D E+GR RP+K  A+ +T+R++A+
Sbjct: 211 AALVNDAESGRRRPQKRGATYFTMRILAQ 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,035,743
Number of Sequences: 53049
Number of extensions: 355074
Number of successful extensions: 823
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)