Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A11
(470 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein. 272 4e-73
D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein. 272 4e-73
BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, sub... 272 4e-73
BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein. 272 4e-73
BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein. 272 4e-73
AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SA... 272 4e-73
BC020600-1|AAH20600.1| 283|Homo sapiens STEAP4 protein protein. 34 0.29
AF423423-1|AAQ04064.1| 494|Homo sapiens six transmembrane prost... 34 0.29
AF423422-1|AAQ04063.1| 459|Homo sapiens six transmembrane prost... 34 0.29
U37012-1|AAC50293.1| 1442|Homo sapiens cleavage and polyadenylat... 31 2.0
BC017232-1|AAH17232.1| 1443|Homo sapiens cleavage and polyadenyl... 31 2.0
AK026806-1|BAB15559.1| 283|Homo sapiens protein ( Homo sapiens ... 31 2.0
AB046744-1|BAB21613.1| 216|Homo sapiens polyadenylation specifi... 31 2.0
BC027936-1|AAH27936.1| 754|Homo sapiens CXorf22 protein protein. 31 2.7
AL590065-1|CAI40038.2| 976|Homo sapiens chromosome X open readi... 31 2.7
AK126295-1|BAC86517.1| 976|Homo sapiens protein ( Homo sapiens ... 31 2.7
>D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein.
Length = 1253
Score = 272 bits (667), Expect = 4e-73
Identities = 116/154 (75%), Positives = 141/154 (91%)
Frame = +2
Query: 8 DKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRA 187
DKFGNI V+RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+HVGETV SLQ+
Sbjct: 1084 DKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKT 1143
Query: 188 TLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY 367
TLIPGGSE+L+Y T+SG +G+++PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 1144 TLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYY 1203
Query: 368 YPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
+PVKNVIDGDLCEQFNS+EP KQK ++ +L+RTP
Sbjct: 1204 FPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 1237
>D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein.
Length = 399
Score = 272 bits (667), Expect = 4e-73
Identities = 116/154 (75%), Positives = 141/154 (91%)
Frame = +2
Query: 8 DKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRA 187
DKFGNI V+RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+HVGETV SLQ+
Sbjct: 230 DKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKT 289
Query: 188 TLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY 367
TLIPGGSE+L+Y T+SG +G+++PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 290 TLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYY 349
Query: 368 YPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
+PVKNVIDGDLCEQFNS+EP KQK ++ +L+RTP
Sbjct: 350 FPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 383
>BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, subunit
3, 130kDa protein.
Length = 1217
Score = 272 bits (667), Expect = 4e-73
Identities = 116/154 (75%), Positives = 141/154 (91%)
Frame = +2
Query: 8 DKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRA 187
DKFGNI V+RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+HVGETV SLQ+
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKT 1107
Query: 188 TLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY 367
TLIPGGSE+L+Y T+SG +G+++PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 1108 TLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYY 1167
Query: 368 YPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
+PVKNVIDGDLCEQFNS+EP KQK ++ +L+RTP
Sbjct: 1168 FPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 1201
>BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 272 bits (667), Expect = 4e-73
Identities = 116/154 (75%), Positives = 141/154 (91%)
Frame = +2
Query: 8 DKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRA 187
DKFGNI V+RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+HVGETV SLQ+
Sbjct: 230 DKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKT 289
Query: 188 TLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY 367
TLIPGGSE+L+Y T+SG +G+++PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 290 TLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYY 349
Query: 368 YPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
+PVKNVIDGDLCEQFNS+EP KQK ++ +L+RTP
Sbjct: 350 FPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 383
>BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 272 bits (667), Expect = 4e-73
Identities = 116/154 (75%), Positives = 141/154 (91%)
Frame = +2
Query: 8 DKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRA 187
DKFGNI V+RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+HVGETV SLQ+
Sbjct: 230 DKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKT 289
Query: 188 TLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY 367
TLIPGGSE+L+Y T+SG +G+++PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 290 TLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYY 349
Query: 368 YPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
+PVKNVIDGDLCEQFNS+EP KQK ++ +L+RTP
Sbjct: 350 FPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 383
>AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SAP 130
protein.
Length = 1217
Score = 272 bits (667), Expect = 4e-73
Identities = 116/154 (75%), Positives = 141/154 (91%)
Frame = +2
Query: 8 DKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRA 187
DKFGNI V+RLP + +D+VDEDPTGNKALWDRGLLNGASQK +V++N+HVGETV SLQ+
Sbjct: 1048 DKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKT 1107
Query: 188 TLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY 367
TLIPGGSE+L+Y T+SG +G+++PFTS EDHDFFQH+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 1108 TLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYY 1167
Query: 368 YPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
+PVKNVIDGDLCEQFNS+EP KQK ++ +L+RTP
Sbjct: 1168 FPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 1201
>BC020600-1|AAH20600.1| 283|Homo sapiens STEAP4 protein protein.
Length = 283
Score = 33.9 bits (74), Expect = 0.29
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 179 QRATLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHL 298
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>AF423423-1|AAQ04064.1| 494|Homo sapiens six transmembrane prostate
protein 2 variant 2 protein.
Length = 494
Score = 33.9 bits (74), Expect = 0.29
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 179 QRATLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHL 298
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>AF423422-1|AAQ04063.1| 459|Homo sapiens six transmembrane prostate
protein 2 variant 1 protein.
Length = 459
Score = 33.9 bits (74), Expect = 0.29
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 179 QRATLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHL 298
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>U37012-1|AAC50293.1| 1442|Homo sapiens cleavage and polyadenylation
specificity factor protein.
Length = 1442
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +2
Query: 221 YATVSGSLGVMLPFTSREDHDFF--QHLEMHMRSENSPLCGRD----HLSFRSYYYPVKN 382
+AT+ G +G++LP + Q+ M ++ L R H+ R+ V+N
Sbjct: 1337 FATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRN 1396
Query: 383 VIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
V+DG+L ++ L ++ +A + TP
Sbjct: 1397 VLDGELLNRYLYLSTMERSELAKKIGTTP 1425
>BC017232-1|AAH17232.1| 1443|Homo sapiens cleavage and polyadenylation
specific factor 1, 160kDa protein.
Length = 1443
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +2
Query: 221 YATVSGSLGVMLPFTSREDHDFF--QHLEMHMRSENSPLCGRD----HLSFRSYYYPVKN 382
+AT+ G +G++LP + Q+ M ++ L R H+ R+ V+N
Sbjct: 1338 FATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRN 1397
Query: 383 VIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
V+DG+L ++ L ++ +A + TP
Sbjct: 1398 VLDGELLNRYLYLSTMERSELAKKIGTTP 1426
>AK026806-1|BAB15559.1| 283|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23153 fis, clone LNG09441. ).
Length = 283
Score = 31.1 bits (67), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 179 QRATLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHL 298
Q+ TL+P G+E L Y+ + +++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSDIIIIAIHREHYDFLTEL 92
>AB046744-1|BAB21613.1| 216|Homo sapiens polyadenylation
specificity factor protein.
Length = 216
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +2
Query: 221 YATVSGSLGVMLPFTSREDHDFF--QHLEMHMRSENSPLCGRD----HLSFRSYYYPVKN 382
+AT+ G +G++LP + Q+ M ++ L R H+ R+ V+N
Sbjct: 111 FATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRN 170
Query: 383 VIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
V+DG+L ++ L ++ +A + TP
Sbjct: 171 VLDGELLNRYLYLSTMERSELAKKIGTTP 199
>BC027936-1|AAH27936.1| 754|Homo sapiens CXorf22 protein protein.
Length = 754
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 122 SQKGDVVVNFHVGETVTSLQRATLIP 199
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>AL590065-1|CAI40038.2| 976|Homo sapiens chromosome X open reading
frame 22 protein.
Length = 976
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 122 SQKGDVVVNFHVGETVTSLQRATLIP 199
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>AK126295-1|BAC86517.1| 976|Homo sapiens protein ( Homo sapiens
cDNA FLJ44315 fis, clone TRACH3000014. ).
Length = 976
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 122 SQKGDVVVNFHVGETVTSLQRATLIP 199
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,143,583
Number of Sequences: 237096
Number of extensions: 1431078
Number of successful extensions: 7357
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7354
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -