BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A11
(470 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p pro... 264 5e-71
BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p pro... 264 5e-71
AY069239-1|AAL39384.1| 688|Drosophila melanogaster GM01240p pro... 264 5e-71
AE014296-140|AAN11452.1| 688|Drosophila melanogaster CG13900-PB... 264 5e-71
AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA... 264 5e-71
AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p pro... 29 2.4
AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA ... 29 2.4
AE014298-1307|AAF46467.2| 370|Drosophila melanogaster CG15370-P... 29 2.4
AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-P... 29 2.4
X99513-1|CAA67863.1| 952|Drosophila melanogaster protein kinase... 29 3.2
BT016092-1|AAV36977.1| 952|Drosophila melanogaster LD39519p pro... 29 3.2
AE014296-3410|AAN12141.1| 952|Drosophila melanogaster CG4268-PC... 29 3.2
AE014296-3409|AAF51635.1| 952|Drosophila melanogaster CG4268-PA... 29 3.2
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 28 5.5
U35074-1|AAC13917.1| 550|Drosophila melanogaster CCF protein. 28 7.3
BT023771-1|AAZ41779.1| 550|Drosophila melanogaster LD47601p pro... 28 7.3
AE014297-178|AAF52073.1| 550|Drosophila melanogaster CG2530-PA ... 28 7.3
>BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p protein.
Length = 1227
Score = 264 bits (646), Expect = 5e-71
Identities = 115/154 (74%), Positives = 139/154 (90%)
Frame = +2
Query: 8 DKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRA 187
DKFGN+++ RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +FHVGE + SLQ+A
Sbjct: 1058 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 1117
Query: 188 TLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY 367
TLIPGGSEAL+YAT+SG++G +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS Y
Sbjct: 1118 TLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSY 1177
Query: 368 YPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
YPVKNV+DGDLCEQ+ S+E AKQK+IAGD+ RTP
Sbjct: 1178 YPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTP 1211
>BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p protein.
Length = 1227
Score = 264 bits (646), Expect = 5e-71
Identities = 115/154 (74%), Positives = 139/154 (90%)
Frame = +2
Query: 8 DKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRA 187
DKFGN+++ RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +FHVGE + SLQ+A
Sbjct: 1058 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 1117
Query: 188 TLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY 367
TLIPGGSEAL+YAT+SG++G +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS Y
Sbjct: 1118 TLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSY 1177
Query: 368 YPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
YPVKNV+DGDLCEQ+ S+E AKQK+IAGD+ RTP
Sbjct: 1178 YPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTP 1211
>AY069239-1|AAL39384.1| 688|Drosophila melanogaster GM01240p
protein.
Length = 688
Score = 264 bits (646), Expect = 5e-71
Identities = 115/154 (74%), Positives = 139/154 (90%)
Frame = +2
Query: 8 DKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRA 187
DKFGN+++ RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +FHVGE + SLQ+A
Sbjct: 519 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 578
Query: 188 TLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY 367
TLIPGGSEAL+YAT+SG++G +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS Y
Sbjct: 579 TLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSY 638
Query: 368 YPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
YPVKNV+DGDLCEQ+ S+E AKQK+IAGD+ RTP
Sbjct: 639 YPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTP 672
>AE014296-140|AAN11452.1| 688|Drosophila melanogaster CG13900-PB,
isoform B protein.
Length = 688
Score = 264 bits (646), Expect = 5e-71
Identities = 115/154 (74%), Positives = 139/154 (90%)
Frame = +2
Query: 8 DKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRA 187
DKFGN+++ RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +FHVGE + SLQ+A
Sbjct: 519 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 578
Query: 188 TLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY 367
TLIPGGSEAL+YAT+SG++G +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS Y
Sbjct: 579 TLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSY 638
Query: 368 YPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
YPVKNV+DGDLCEQ+ S+E AKQK+IAGD+ RTP
Sbjct: 639 YPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTP 672
>AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA,
isoform A protein.
Length = 1227
Score = 264 bits (646), Expect = 5e-71
Identities = 115/154 (74%), Positives = 139/154 (90%)
Frame = +2
Query: 8 DKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDVVVNFHVGETVTSLQRA 187
DKFGN+++ RLP SV+DDVDEDPTG K+LWDRGLL+GASQK + + +FHVGE + SLQ+A
Sbjct: 1058 DKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKA 1117
Query: 188 TLIPGGSEALLYATVSGSLGVMLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSYY 367
TLIPGGSEAL+YAT+SG++G +PFTSRED+DFFQHLEMHMR+EN PLCGRDHLS+RS Y
Sbjct: 1118 TLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSY 1177
Query: 368 YPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP 469
YPVKNV+DGDLCEQ+ S+E AKQK+IAGD+ RTP
Sbjct: 1178 YPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTP 1211
>AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p protein.
Length = 1412
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 229 SERFPRGDASVHLEGRPRLLPTFRDAHEK 315
+E+FPRG A LE P L+P ++ EK
Sbjct: 1211 AEKFPRGGAVGILEKHPELVPQYQSLAEK 1239
>AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA
stability factor protein.
Length = 1412
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 229 SERFPRGDASVHLEGRPRLLPTFRDAHEK 315
+E+FPRG A LE P L+P ++ EK
Sbjct: 1211 AEKFPRGGAVGILEKHPELVPQYQSLAEK 1239
>AE014298-1307|AAF46467.2| 370|Drosophila melanogaster CG15370-PA
protein.
Length = 370
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -1
Query: 167 QSHQHGN*LQHPLFAMRHLKDLYPIELYSQSDLHRHHH*QTAVVSSP 27
Q H H HP+ + D Y S + H HHH QT + P
Sbjct: 174 QQHHHHTHTHHPV-EEEEVDDDYGYHYPSGGNHHHHHHHQTGAYAEP 219
>AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-PA
protein.
Length = 1412
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 229 SERFPRGDASVHLEGRPRLLPTFRDAHEK 315
+E+FPRG A LE P L+P ++ EK
Sbjct: 1211 AEKFPRGGAVGILEKHPELVPQYQSLAEK 1239
>X99513-1|CAA67863.1| 952|Drosophila melanogaster protein kinase
protein.
Length = 952
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -1
Query: 182 AAVTSQSHQHGN*LQHPLFAMRHLKDLYPIELYSQSDLHRHHH*QTAVVSSPQCYQTYPS 3
AA H G+ +P + + L P Y+ H H H + ++P+ Y +YPS
Sbjct: 104 AAAAYAKHHLGHAYHYPQPPQQQQQPLPPAPSYAAHHYHHHQH-LSGARAAPREYHSYPS 162
>BT016092-1|AAV36977.1| 952|Drosophila melanogaster LD39519p
protein.
Length = 952
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -1
Query: 182 AAVTSQSHQHGN*LQHPLFAMRHLKDLYPIELYSQSDLHRHHH*QTAVVSSPQCYQTYPS 3
AA H G+ +P + + L P Y+ H H H + ++P+ Y +YPS
Sbjct: 104 AAAAYAKHHLGHAYHYPQPPQQQQQPLPPAPSYAAHHYHHHQH-LSGARAAPREYHSYPS 162
>AE014296-3410|AAN12141.1| 952|Drosophila melanogaster CG4268-PC,
isoform C protein.
Length = 952
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -1
Query: 182 AAVTSQSHQHGN*LQHPLFAMRHLKDLYPIELYSQSDLHRHHH*QTAVVSSPQCYQTYPS 3
AA H G+ +P + + L P Y+ H H H + ++P+ Y +YPS
Sbjct: 104 AAAAYAKHHLGHAYHYPQPPQQQQQPLPPAPSYAAHHYHHHQH-LSGARAAPREYHSYPS 162
>AE014296-3409|AAF51635.1| 952|Drosophila melanogaster CG4268-PA,
isoform A protein.
Length = 952
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -1
Query: 182 AAVTSQSHQHGN*LQHPLFAMRHLKDLYPIELYSQSDLHRHHH*QTAVVSSPQCYQTYPS 3
AA H G+ +P + + L P Y+ H H H + ++P+ Y +YPS
Sbjct: 104 AAAAYAKHHLGHAYHYPQPPQQQQQPLPPAPSYAAHHYHHHQH-LSGARAAPREYHSYPS 162
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -1
Query: 341 PARTVASFRF-SCASLNVGRSRGLPSR*TEASPRGNRSLLRITE--LPNR 201
P TV S F + ++ +G +RG + T +SP R+ +R+ E LP+R
Sbjct: 4094 PDTTVPSITFETTTNIPIGTTRGQVTEQTTSSPSEKRTTIRVEESTLPSR 4143
>U35074-1|AAC13917.1| 550|Drosophila melanogaster CCF protein.
Length = 550
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -1
Query: 173 TSQSHQHGN*LQHPLFAMRHLKDLYPIELYSQSDLHRHHH*QTAVVSS 30
T Q H H QH A ++ Q HRHHH Q A SS
Sbjct: 39 TQQQHHHQQQQQHMYHAAVAAHQQQLLQQQQQQQHHRHHH-QPANTSS 85
>BT023771-1|AAZ41779.1| 550|Drosophila melanogaster LD47601p
protein.
Length = 550
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -1
Query: 173 TSQSHQHGN*LQHPLFAMRHLKDLYPIELYSQSDLHRHHH*QTAVVSS 30
T Q H H QH A ++ Q HRHHH Q A SS
Sbjct: 39 TQQQHHHQQQQQHMYHAAVAAHQQQLLQQQQQQQHHRHHH-QPANTSS 85
>AE014297-178|AAF52073.1| 550|Drosophila melanogaster CG2530-PA
protein.
Length = 550
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -1
Query: 173 TSQSHQHGN*LQHPLFAMRHLKDLYPIELYSQSDLHRHHH*QTAVVSS 30
T Q H H QH A ++ Q HRHHH Q A SS
Sbjct: 39 TQQQHHHQQQQQHMYHAAVAAHQQQLLQQQQQQQHHRHHH-QPANTSS 85
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,850,357
Number of Sequences: 53049
Number of extensions: 465128
Number of successful extensions: 1208
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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