Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A10
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 206 3e-53
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 206 3e-53
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 206 3e-53
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 206 3e-53
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 206 3e-53
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 205 6e-53
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 203 2e-52
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 198 9e-51
L29222-1|AAB59459.1| 136|Homo sapiens clk1 protein. 31 2.4
L29219-1|AAA61480.1| 484|Homo sapiens clk1 protein. 31 2.4
BC031549-1|AAH31549.1| 484|Homo sapiens CDC-like kinase 1 protein. 31 2.4
BC028149-1|AAH28149.1| 136|Homo sapiens CDC-like kinase 1 protein. 31 2.4
AC005037-5|AAY14722.1| 484|Homo sapiens unknown protein. 31 2.4
U75697-1|AAB88241.1| 428|Homo sapiens RPD3-2B protein. 30 3.1
U75696-1|AAB88240.1| 429|Homo sapiens RPD3-2A protein. 30 3.1
U66914-1|AAC52038.1| 428|Homo sapiens histone deacetylase 3 pro... 30 3.1
BC000614-1|AAH00614.1| 428|Homo sapiens histone deacetylase 3 p... 30 3.1
AF059650-1|AAC26509.1| 428|Homo sapiens histone deacetylase 3 p... 30 3.1
AF053138-1|AAC08351.1| 259|Homo sapiens histone deacetylase 3 p... 30 3.1
AF039703-1|AAC98927.1| 428|Homo sapiens histone deacetylase 3 p... 30 3.1
AF005482-1|AAB87752.1| 371|Homo sapiens histone deacetylase-3C ... 30 3.1
AK124794-1|BAC85951.1| 244|Homo sapiens protein ( Homo sapiens ... 29 5.5
BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein. 29 9.6
BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein. 29 9.6
AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger pr... 29 9.6
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 206 bits (503), Expect = 3e-53
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 205 bits (500), Expect = 6e-53
Identities = 94/123 (76%), Positives = 109/123 (88%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 203 bits (495), Expect = 2e-52
Identities = 95/123 (77%), Positives = 107/123 (86%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLPHI GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 437 VVI 445
V +
Sbjct: 121 VTV 123
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 198 bits (482), Expect = 9e-51
Identities = 93/123 (75%), Positives = 108/123 (87%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NPALE+LLP ++GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 119
Query: 437 VVI 445
V +
Sbjct: 120 VTV 122
>L29222-1|AAB59459.1| 136|Homo sapiens clk1 protein.
Length = 136
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 202 DPYFIAWSQHCAHGQKHHDEESHQGPS*NKSSSRTTASSHQGKCRL 339
D Y ++Q C G + D ES +KSS R+ SS++ K R+
Sbjct: 74 DEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRI 119
>L29219-1|AAA61480.1| 484|Homo sapiens clk1 protein.
Length = 484
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 202 DPYFIAWSQHCAHGQKHHDEESHQGPS*NKSSSRTTASSHQGKCRL 339
D Y ++Q C G + D ES +KSS R+ SS++ K R+
Sbjct: 74 DEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRI 119
>BC031549-1|AAH31549.1| 484|Homo sapiens CDC-like kinase 1 protein.
Length = 484
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 202 DPYFIAWSQHCAHGQKHHDEESHQGPS*NKSSSRTTASSHQGKCRL 339
D Y ++Q C G + D ES +KSS R+ SS++ K R+
Sbjct: 74 DEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRI 119
>BC028149-1|AAH28149.1| 136|Homo sapiens CDC-like kinase 1 protein.
Length = 136
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 202 DPYFIAWSQHCAHGQKHHDEESHQGPS*NKSSSRTTASSHQGKCRL 339
D Y ++Q C G + D ES +KSS R+ SS++ K R+
Sbjct: 74 DEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRI 119
>AC005037-5|AAY14722.1| 484|Homo sapiens unknown protein.
Length = 484
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 202 DPYFIAWSQHCAHGQKHHDEESHQGPS*NKSSSRTTASSHQGKCRL 339
D Y ++Q C G + D ES +KSS R+ SS++ K R+
Sbjct: 74 DEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRI 119
>U75697-1|AAB88241.1| 428|Homo sapiens RPD3-2B protein.
Length = 428
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 89 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 226
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>U75696-1|AAB88240.1| 429|Homo sapiens RPD3-2A protein.
Length = 429
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 89 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 226
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 229 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 277
>U66914-1|AAC52038.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 89 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 226
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>BC000614-1|AAH00614.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 89 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 226
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF059650-1|AAC26509.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 89 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 226
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF053138-1|AAC08351.1| 259|Homo sapiens histone deacetylase 3
protein.
Length = 259
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 89 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 226
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 134 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 182
>AF039703-1|AAC98927.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 89 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 226
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF005482-1|AAB87752.1| 371|Homo sapiens histone deacetylase-3C
protein.
Length = 371
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 89 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 226
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 171 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 219
>AK124794-1|BAC85951.1| 244|Homo sapiens protein ( Homo sapiens
cDNA FLJ42804 fis, clone BRCAN2002856, highly similar
to AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY A
MEMBER 2. ).
Length = 244
Score = 29.5 bits (63), Expect = 5.5
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +2
Query: 221 GHSIVLMGKNTMMRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQ 400
G+ +VLM + M R A +D +ET P ++ K + VF D+ KV
Sbjct: 156 GNIVVLMARRRMPRSASQDCIETTPGAQEGKKQYK-MICHVFESEDVSKPLPGHSPPKVH 214
Query: 401 APAR---PGAI 424
+P R PGA+
Sbjct: 215 SPGRLQDPGAV 225
>BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein.
Length = 433
Score = 28.7 bits (61), Expect = 9.6
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 148 PKMFHSGCGQCRLATDATDPYFIAWSQHCAHGQKHHDEESHQGPS*NKSSSR--TTASSH 321
P H C C+++ Y +H GQKH +E+ S N SSS T + +
Sbjct: 327 PPQIHY-CDVCKISCAGPQTY----KEHL-EGQKHKKKEAALKASQNTSSSNSSTRGTQN 380
Query: 322 QGKCRLC 342
Q +C LC
Sbjct: 381 QLRCELC 387
>BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein.
Length = 615
Score = 28.7 bits (61), Expect = 9.6
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 148 PKMFHSGCGQCRLATDATDPYFIAWSQHCAHGQKHHDEESHQGPS*NKSSSR--TTASSH 321
P H C C+++ Y +H GQKH +E+ S N SSS T + +
Sbjct: 327 PPQIHY-CDVCKISCAGPQTY----KEHL-EGQKHKKKEAALKASQNTSSSNSSTRGTQN 380
Query: 322 QGKCRLC 342
Q +C LC
Sbjct: 381 QLRCELC 387
>AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger
protein protein.
Length = 1057
Score = 28.7 bits (61), Expect = 9.6
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 148 PKMFHSGCGQCRLATDATDPYFIAWSQHCAHGQKHHDEESHQGPS*NKSSSR--TTASSH 321
P H C C+++ Y +H GQKH +E+ S N SSS T + +
Sbjct: 305 PPQIHY-CDVCKISCAGPQTY----KEHL-EGQKHKKKEAALKASQNTSSSNSSTRGTQN 358
Query: 322 QGKCRLC 342
Q +C LC
Sbjct: 359 QLRCELC 365
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,145,905
Number of Sequences: 237096
Number of extensions: 1744841
Number of successful extensions: 3522
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 3415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3520
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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