Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A10
(445 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 208 2e-54
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 208 2e-54
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 208 2e-54
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 208 2e-54
AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p pro... 43 2e-04
AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA... 43 2e-04
BT021383-1|AAX33531.1| 1117|Drosophila melanogaster LD37257p pro... 27 8.7
AY061106-1|AAL28654.1| 1177|Drosophila melanogaster LD09503p pro... 27 8.7
AE014296-2728|AAF49469.2| 1117|Drosophila melanogaster CG4877-PB... 27 8.7
AE014296-2727|AAF49470.3| 1117|Drosophila melanogaster CG4877-PA... 27 8.7
AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-P... 27 8.7
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 208 bits (509), Expect = 2e-54
Identities = 94/123 (76%), Positives = 111/123 (90%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NP LE+LLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAIAPL
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120
Query: 437 VVI 445
V+I
Sbjct: 121 VII 123
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 208 bits (509), Expect = 2e-54
Identities = 94/123 (76%), Positives = 111/123 (90%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NP LE+LLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAIAPL
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120
Query: 437 VVI 445
V+I
Sbjct: 121 VII 123
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 208 bits (509), Expect = 2e-54
Identities = 94/123 (76%), Positives = 111/123 (90%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NP LE+LLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAIAPL
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120
Query: 437 VVI 445
V+I
Sbjct: 121 VII 123
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 208 bits (509), Expect = 2e-54
Identities = 94/123 (76%), Positives = 111/123 (90%)
Frame = +2
Query: 77 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 256
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 257 MRKAIKDHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 436
MRKAI+ HLE NP LE+LLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAIAPL
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120
Query: 437 VVI 445
V+I
Sbjct: 121 VII 123
>AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p
protein.
Length = 256
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = +2
Query: 101 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 274
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 275 DHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 445
E P L +L + G VG +FT +V + AR G +A +V +
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTL 138
>AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA
protein.
Length = 256
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = +2
Query: 101 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 274
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 275 DHLETNPALEQLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 445
E P L +L + G VG +FT +V + AR G +A +V +
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTL 138
>BT021383-1|AAX33531.1| 1117|Drosophila melanogaster LD37257p protein.
Length = 1117
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 226 QHCAHGQKHHDEESHQGPS*NKSSSRTTASSHQGKCRLC 342
+H +H +K H +SH+ S +KS + ++A+ + R C
Sbjct: 1040 RHKSHKRKSHKHKSHKHRSSHKSQAESSATINGNTGRQC 1078
>AY061106-1|AAL28654.1| 1177|Drosophila melanogaster LD09503p protein.
Length = 1177
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 226 QHCAHGQKHHDEESHQGPS*NKSSSRTTASSHQGKCRLC 342
+H +H +K H +SH+ S +KS + ++A+ + R C
Sbjct: 1100 RHKSHKRKSHKHKSHKHRSSHKSQAESSATINGNTGRQC 1138
>AE014296-2728|AAF49469.2| 1117|Drosophila melanogaster CG4877-PB,
isoform B protein.
Length = 1117
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 226 QHCAHGQKHHDEESHQGPS*NKSSSRTTASSHQGKCRLC 342
+H +H +K H +SH+ S +KS + ++A+ + R C
Sbjct: 1040 RHKSHKRKSHKHKSHKHRSSHKSQAESSATINGNTGRQC 1078
>AE014296-2727|AAF49470.3| 1117|Drosophila melanogaster CG4877-PA,
isoform A protein.
Length = 1117
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 226 QHCAHGQKHHDEESHQGPS*NKSSSRTTASSHQGKCRLC 342
+H +H +K H +SH+ S +KS + ++A+ + R C
Sbjct: 1040 RHKSHKRKSHKHKSHKHRSSHKSQAESSATINGNTGRQC 1078
>AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-PA
protein.
Length = 1025
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 38 LKFLRSPYFTQSKMGREDKATWKSNYFVKIIQL 136
++F+RS YFT R K TW + + QL
Sbjct: 891 IQFMRSKYFTYGNYSRYPKYTWCKRFRSRAEQL 923
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,267,060
Number of Sequences: 53049
Number of extensions: 509702
Number of successful extensions: 2204
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2204
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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