Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A09
(411 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 213 4e-56
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 212 1e-55
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 208 2e-54
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 206 5e-54
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 206 5e-54
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 200 3e-52
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 124 1e-33
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 103 4e-23
05_06_0104 - 25603568-25603867,25603965-25604162,25604247-256045... 27 5.8
03_04_0054 + 16883678-16883719,16884667-16884723,16884852-168849... 27 5.8
01_07_0014 - 40455673-40455723,40455815-40455892,40455987-404560... 27 5.8
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 213 bits (521), Expect = 4e-56
Identities = 99/132 (75%), Positives = 114/132 (86%)
Frame = +3
Query: 12 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 191
LLD HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+ A+
Sbjct: 328 LLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAE 387
Query: 192 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 371
+ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQ
Sbjct: 388 LPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQ 447
Query: 372 LLRDNLTLWTSD 407
LLRDNLTLWTSD
Sbjct: 448 LLRDNLTLWTSD 459
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 212 bits (517), Expect = 1e-55
Identities = 98/132 (74%), Positives = 114/132 (86%)
Frame = +3
Query: 12 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 191
LL+ HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+ A+
Sbjct: 110 LLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAE 169
Query: 192 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 371
+ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQ
Sbjct: 170 LPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQ 229
Query: 372 LLRDNLTLWTSD 407
LLRDNLTLWTSD
Sbjct: 230 LLRDNLTLWTSD 241
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 208 bits (507), Expect = 2e-54
Identities = 98/132 (74%), Positives = 110/132 (83%)
Frame = +3
Query: 12 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 191
LLD HL+P ++ ESKVFYLKMKGDY+RYLAE TG R E + AY+ A +I+ A
Sbjct: 104 LLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALAD 163
Query: 192 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 371
+ PTHPIRLGLALNFSVFYYEILNSPDKAC LAKQAFD+AI+ELDTL E+SYKDSTLIMQ
Sbjct: 164 LAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQ 223
Query: 372 LLRDNLTLWTSD 407
LLRDNLTLWTSD
Sbjct: 224 LLRDNLTLWTSD 235
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 206 bits (503), Expect = 5e-54
Identities = 96/132 (72%), Positives = 110/132 (83%)
Frame = +3
Query: 12 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 191
LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+ R E + AY+ A +I+ A
Sbjct: 87 LLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALAD 146
Query: 192 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 371
+ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD+L E+SYKDSTLIMQ
Sbjct: 147 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQ 206
Query: 372 LLRDNLTLWTSD 407
LLRDNLTLWTSD
Sbjct: 207 LLRDNLTLWTSD 218
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 206 bits (503), Expect = 5e-54
Identities = 98/132 (74%), Positives = 110/132 (83%)
Frame = +3
Query: 12 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 191
LLD HL+P A+ ESKVFYLKMKGDY+RYLAE +G R E++ AY+ A +I+ A
Sbjct: 109 LLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALAD 168
Query: 192 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 371
+ THPIRLGLALNFSVFYYEILNSPD+AC LAKQAFDDAIAELDTL E+SYKDSTLIMQ
Sbjct: 169 LPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQ 228
Query: 372 LLRDNLTLWTSD 407
LLRDNLTLWTSD
Sbjct: 229 LLRDNLTLWTSD 240
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 200 bits (488), Expect = 3e-52
Identities = 94/132 (71%), Positives = 110/132 (83%)
Frame = +3
Query: 12 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 191
LLD+ L+P A+ ++KVFYLKMKGDY+RYLAE TG R + + AYQ A +I+ +
Sbjct: 114 LLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKE 173
Query: 192 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 371
+ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQ
Sbjct: 174 LSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQ 233
Query: 372 LLRDNLTLWTSD 407
LLRDNLTLWTSD
Sbjct: 234 LLRDNLTLWTSD 245
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 124 bits (298), Expect(2) = 1e-33
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = +3
Query: 168 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 347
A + ++ + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205
Query: 348 KDSTLIMQLLRDNLTLWTSD 407
KDSTLIMQLLRDNL LW SD
Sbjct: 206 KDSTLIMQLLRDNLALWNSD 225
Score = 36.3 bits (80), Expect(2) = 1e-33
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3
Query: 78 KGDYYRYLAEVATGETRHSVVEDSQKAYQ 164
KGDYYRYLAE TG + V E S AY+
Sbjct: 85 KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 103 bits (248), Expect = 4e-23
Identities = 57/128 (44%), Positives = 83/128 (64%)
Frame = +3
Query: 24 HLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPT 203
H +P A++ E+ VF+ KMKGDYYRYLAE +TG + + + S AYQ A+ ++
Sbjct: 105 HCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ-AWPCAQL----- 158
Query: 204 HPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRD 383
FS+ EI+NSP++A Q+AKQA D+A AE+++ + YKDS L+MQLL++
Sbjct: 159 ----------FSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKE 206
Query: 384 NLTLWTSD 407
NL LWTS+
Sbjct: 207 NLALWTSE 214
>05_06_0104 -
25603568-25603867,25603965-25604162,25604247-25604526,
25604615-25605419,25605518-25606673
Length = 912
Score = 27.1 bits (57), Expect = 5.8
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Frame = +3
Query: 84 DYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS---KAKMQPTHPIR-----LGLALNFS 239
+Y +Y+ + A E R V ++ + D I K K + H +R L +A S
Sbjct: 321 EYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKYEGHHGVRIQDRALVVAAQLS 380
Query: 240 VFYYEILNSPDKACQLAKQAFDDAIAELDTLNED 341
Y + PDKA L +A + +LD+ E+
Sbjct: 381 ARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEE 414
>03_04_0054 +
16883678-16883719,16884667-16884723,16884852-16884959,
16885028-16885102,16885744-16885833,16885950-16886057,
16886137-16886211,16886371-16886433,16886531-16886924,
16888539-16888651,16888799-16888829,16888987-16889864
Length = 677
Score = 27.1 bits (57), Expect = 5.8
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 174 EISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAF--DDAIAELDTLNEDSY 347
E K T+ L AL F +Y+I + ++ QLA+ AF ++ ++ + L + +
Sbjct: 78 EFFKVHCPDTNSAYLDKALQFGDLHYQINDFKEQTLQLARLAFHEEEEKSQAELLEKLNK 137
Query: 348 KDSTLIMQLLR 380
+ I++L R
Sbjct: 138 SNKDTIVELCR 148
>01_07_0014 -
40455673-40455723,40455815-40455892,40455987-40456049,
40456250-40456390,40456851-40456949,40457403-40457477,
40457556-40457652,40457738-40457805,40458456-40458512,
40458613-40458671,40458798-40458921,40459208-40459264,
40459378-40459457,40459585-40459793,40459868-40459986
Length = 458
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 252 EILNSPDKACQLAKQAFDDAIAELDTLNEDSYKD 353
E+ + A LAK A DD EL LN D+Y +
Sbjct: 73 EVAQAKAAAKALAKGAVDDVADELKELNMDNYDE 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,406,927
Number of Sequences: 37544
Number of extensions: 205525
Number of successful extensions: 569
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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