Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A05
(346 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 1.8
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 1.8
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 5.4
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 5.4
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 20 7.2
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 20 7.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 9.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 9.5
AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. 20 9.5
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 20 9.5
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 1.8
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -1
Query: 202 PSTNVRNLRSYVMLDVLLTMDATSSTAQSMDPSMSGGNSKMNYIVCKI 59
P T R ++M + L + T T + P + GN K+N I+ +
Sbjct: 208 PMTFCRVFPFHLMFNRDLIIVQTGCTITRVIPQVCSGNCKLNDILLTV 255
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 1.8
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -1
Query: 202 PSTNVRNLRSYVMLDVLLTMDATSSTAQSMDPSMSGGNSKMNYIVCKI 59
P T R ++M + L + T T + P + GN K+N I+ +
Sbjct: 208 PMTFCRVFPFHLMFNRDLIIVQTGCTITRVIPQVCSGNCKLNDILLTV 255
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +1
Query: 37 GVYYYFKIFYTLCSSFWNFLQ 99
G++ YF + + S+W +Q
Sbjct: 221 GIWVYFVPLFLIIYSYWFIIQ 241
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +1
Query: 37 GVYYYFKIFYTLCSSFWNFLQ 99
G++ YF + + S+W +Q
Sbjct: 97 GIWVYFVPLFLIIYSYWFIIQ 117
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 129 LDVASIVSKTSS 164
LDV+S SKTSS
Sbjct: 9 LDVSSAASKTSS 20
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 173 LRDAGRFANDGCNVKYRPE 117
+RD +FAN G V R E
Sbjct: 96 IRDFSKFANRGLGVFERTE 114
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 14 FFFFFLLWECIIIS 55
++FF L+ C++IS
Sbjct: 196 YYFFNLIVPCVLIS 209
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 14 FFFFFLLWECIIIS 55
++FF L+ C++IS
Sbjct: 196 YYFFNLIVPCVLIS 209
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 14 FFFFFLLWECIIIS 55
++FF L+ C++IS
Sbjct: 196 YYFFNLIVPCVLIS 209
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 14 FFFFFLLWECIIIS 55
++FF L+ C++IS
Sbjct: 196 YYFFNLIVPCVLIS 209
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 14 FFFFFLLWECIIIS 55
++FF L+ C++IS
Sbjct: 196 YYFFNLIVPCVLIS 209
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 14 FFFFFLLWECIIIS 55
++FF L+ C++IS
Sbjct: 196 YYFFNLIVPCVLIS 209
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 14 FFFFFLLWECIIIS 55
++FF L+ C++IS
Sbjct: 264 YYFFNLIVPCVLIS 277
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 14 FFFFFLLWECIIIS 55
++FF L+ C++IS
Sbjct: 264 YYFFNLIVPCVLIS 277
>AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein.
Length = 50
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = +3
Query: 93 PPDIEGSMLWAVLDVASIV 149
P D GS+ W++ + ++V
Sbjct: 31 PKDHNGSIYWSMYHLCTVV 49
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 19.8 bits (39), Expect = 9.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 89 ISSRHRGVH 115
IS RHRG H
Sbjct: 207 ISMRHRGAH 215
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,079
Number of Sequences: 438
Number of extensions: 1618
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 7812315
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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