Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A02
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D44466-1|BAA07918.1| 953|Homo sapiens proteasome subunit p112 p... 61 8e-14
BC114434-1|AAI14435.1| 953|Homo sapiens proteasome 26S non-ATPa... 61 8e-14
BC112344-1|AAI12345.1| 953|Homo sapiens proteasome (prosome, ma... 61 8e-14
BC094720-1|AAH94720.1| 953|Homo sapiens proteasome (prosome, ma... 61 8e-14
AC009407-1|AAX93127.1| 953|Homo sapiens unknown protein. 61 8e-14
BC073833-1|AAH73833.1| 865|Homo sapiens PSMD1 protein protein. 59 8e-09
BC001053-1|AAH01053.1| 869|Homo sapiens PSMD1 protein protein. 59 8e-09
BC047897-1|AAH47897.1| 844|Homo sapiens PSMD1 protein protein. 52 1e-06
BC020223-1|AAH20223.1| 856|Homo sapiens Unknown (protein for IM... 52 1e-06
BC014013-1|AAH14013.1| 848|Homo sapiens PSMD1 protein protein. 52 1e-06
BC039845-1|AAH39845.1| 825|Homo sapiens Similar to proteasome (... 41 0.002
BC032445-1|AAH32445.1| 824|Homo sapiens PSMD1 protein protein. 41 0.002
AB058746-1|BAB47472.2| 1778|Homo sapiens KIAA1843 protein protein. 29 9.6
>D44466-1|BAA07918.1| 953|Homo sapiens proteasome subunit p112
protein.
Length = 953
Score = 60.9 bits (141), Expect(2) = 8e-14
Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSIAAAKARRRAHGEGXXXX 183
+ LKMP+++ KSN KPS +AYPAPL V+TAVLSI A ++ E
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKE----- 847
Query: 184 XXXXXXXKMEVDE----EEKKPTKSPNPN 258
KMEVDE EEK+ K P PN
Sbjct: 848 --KKEEEKMEVDEAEKKEEKEKKKEPEPN 874
Score = 34.7 bits (76), Expect(2) = 8e-14
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 361 PTFEILSNPARVMRQQLKVLSVVE 432
P F++L NPARVM QLKVL++ E
Sbjct: 873 PNFQLLDNPARVMPAQLKVLTMPE 896
>BC114434-1|AAI14435.1| 953|Homo sapiens proteasome 26S non-ATPase
subunit 1 protein.
Length = 953
Score = 60.9 bits (141), Expect(2) = 8e-14
Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSIAAAKARRRAHGEGXXXX 183
+ LKMP+++ KSN KPS +AYPAPL V+TAVLSI A ++ E
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKE----- 847
Query: 184 XXXXXXXKMEVDE----EEKKPTKSPNPN 258
KMEVDE EEK+ K P PN
Sbjct: 848 --KKEEEKMEVDEAEKKEEKEKKKEPEPN 874
Score = 34.7 bits (76), Expect(2) = 8e-14
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 361 PTFEILSNPARVMRQQLKVLSVVE 432
P F++L NPARVM QLKVL++ E
Sbjct: 873 PNFQLLDNPARVMPAQLKVLTMPE 896
>BC112344-1|AAI12345.1| 953|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 1 protein.
Length = 953
Score = 60.9 bits (141), Expect(2) = 8e-14
Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSIAAAKARRRAHGEGXXXX 183
+ LKMP+++ KSN KPS +AYPAPL V+TAVLSI A ++ E
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKE----- 847
Query: 184 XXXXXXXKMEVDE----EEKKPTKSPNPN 258
KMEVDE EEK+ K P PN
Sbjct: 848 --KKEEEKMEVDEAEKKEEKEKKKEPEPN 874
Score = 34.7 bits (76), Expect(2) = 8e-14
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 361 PTFEILSNPARVMRQQLKVLSVVE 432
P F++L NPARVM QLKVL++ E
Sbjct: 873 PNFQLLDNPARVMPAQLKVLTMPE 896
>BC094720-1|AAH94720.1| 953|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 1 protein.
Length = 953
Score = 60.9 bits (141), Expect(2) = 8e-14
Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSIAAAKARRRAHGEGXXXX 183
+ LKMP+++ KSN KPS +AYPAPL V+TAVLSI A ++ E
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKE----- 847
Query: 184 XXXXXXXKMEVDE----EEKKPTKSPNPN 258
KMEVDE EEK+ K P PN
Sbjct: 848 --KKEEEKMEVDEAEKKEEKEKKKEPEPN 874
Score = 34.7 bits (76), Expect(2) = 8e-14
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 361 PTFEILSNPARVMRQQLKVLSVVE 432
P F++L NPARVM QLKVL++ E
Sbjct: 873 PNFQLLDNPARVMPAQLKVLTMPE 896
>AC009407-1|AAX93127.1| 953|Homo sapiens unknown protein.
Length = 953
Score = 60.9 bits (141), Expect(2) = 8e-14
Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSIAAAKARRRAHGEGXXXX 183
+ LKMP+++ KSN KPS +AYPAPL V+TAVLSI A ++ E
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKE----- 847
Query: 184 XXXXXXXKMEVDE----EEKKPTKSPNPN 258
KMEVDE EEK+ K P PN
Sbjct: 848 --KKEEEKMEVDEAEKKEEKEKKKEPEPN 874
Score = 34.7 bits (76), Expect(2) = 8e-14
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 361 PTFEILSNPARVMRQQLKVLSVVE 432
P F++L NPARVM QLKVL++ E
Sbjct: 873 PNFQLLDNPARVMPAQLKVLTMPE 896
>BC073833-1|AAH73833.1| 865|Homo sapiens PSMD1 protein protein.
Length = 865
Score = 58.8 bits (136), Expect = 8e-09
Identities = 35/80 (43%), Positives = 43/80 (53%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSIAAAKARRRAHGEGXXXX 183
+ LKMP+++ KSN KPS +AYPAPL V+TAVLSI A ++ E
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKE----- 847
Query: 184 XXXXXXXKMEVDEEEKKPTK 243
KMEVDE EKK K
Sbjct: 848 --KKEEEKMEVDEAEKKKKK 865
>BC001053-1|AAH01053.1| 869|Homo sapiens PSMD1 protein protein.
Length = 869
Score = 58.8 bits (136), Expect = 8e-09
Identities = 35/80 (43%), Positives = 43/80 (53%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSIAAAKARRRAHGEGXXXX 183
+ LKMP+++ KSN KPS +AYPAPL V+TAVLSI A ++ E
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKE----- 847
Query: 184 XXXXXXXKMEVDEEEKKPTK 243
KMEVDE EKK K
Sbjct: 848 --KKEEEKMEVDEAEKKEEK 865
>BC047897-1|AAH47897.1| 844|Homo sapiens PSMD1 protein protein.
Length = 844
Score = 51.6 bits (118), Expect = 1e-06
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSIAAAKARRR 156
+ LKMP+++ KSN KPS +AYPAPL V+TAVLSI AKA+++
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSI-TAKAKKK 842
>BC020223-1|AAH20223.1| 856|Homo sapiens Unknown (protein for
IMAGE:5087823) protein.
Length = 856
Score = 51.6 bits (118), Expect = 1e-06
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSIAAAKARRR 156
+ LKMP+++ KSN KPS +AYPAPL V+TAVLSI AKA+++
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSI-TAKAKKK 842
>BC014013-1|AAH14013.1| 848|Homo sapiens PSMD1 protein protein.
Length = 848
Score = 51.6 bits (118), Expect = 1e-06
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSIAAAKARRR 156
+ LKMP+++ KSN KPS +AYPAPL V+TAVLSI AKA+++
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSI-TAKAKKK 842
>BC039845-1|AAH39845.1| 825|Homo sapiens Similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 1 protein.
Length = 825
Score = 40.7 bits (91), Expect = 0.002
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPL 78
+ LKMP+++ KSN KPS +AYPAPL
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPL 817
>BC032445-1|AAH32445.1| 824|Homo sapiens PSMD1 protein protein.
Length = 824
Score = 40.7 bits (91), Expect = 0.002
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +1
Query: 4 RGLKMPQLEMKSNAKPSLYAYPAPL 78
+ LKMP+++ KSN KPS +AYPAPL
Sbjct: 793 KDLKMPKVQYKSNCKPSTFAYPAPL 817
>AB058746-1|BAB47472.2| 1778|Homo sapiens KIAA1843 protein protein.
Length = 1778
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 182 LLAEPSPCALLRAFAAAILNTAV 114
L+ P ALLR +AA ++NTAV
Sbjct: 1372 LILHPEDSALLRQYAATVINTAV 1394
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.312 0.127 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,295,305
Number of Sequences: 237096
Number of extensions: 649137
Number of successful extensions: 852
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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