Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A02
(445 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p pro... 69 3e-12
AY069503-1|AAL39648.1| 630|Drosophila melanogaster LD22648p pro... 69 3e-12
AF312231-1|AAG33625.1| 946|Drosophila melanogaster proteosome s... 69 3e-12
AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteaso... 69 3e-12
AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-P... 69 3e-12
>BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p protein.
Length = 1020
Score = 68.9 bits (161), Expect = 3e-12
Identities = 57/158 (36%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Frame = +1
Query: 10 LKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSI-AAAKARR---RAHGEGXX 177
LKMP++E KS AKPSLYAYPAPL V TAVLSI A K R + E
Sbjct: 811 LKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAVLSIAARQKRRENADKKEDEKMD 870
Query: 178 XXXXXXXXXKMEVDEEEK---------KPTKSPNPNITVHXXXXXXXXXXXXXXXXXXXX 330
++ DEE K KP K
Sbjct: 871 VDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKE-KKKEEDKEKEAAGTSSEKDKDKE 929
Query: 331 XXXXXXXXXXPTFEILSNPARVMRQQLKVLSVVEGSGF 444
PT EIL NPARV+RQQLKVLSV++G +
Sbjct: 930 KDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSY 967
>AY069503-1|AAL39648.1| 630|Drosophila melanogaster LD22648p
protein.
Length = 630
Score = 68.9 bits (161), Expect = 3e-12
Identities = 57/158 (36%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Frame = +1
Query: 10 LKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSI-AAAKARR---RAHGEGXX 177
LKMP++E KS AKPSLYAYPAPL V TAVLSI A K R + E
Sbjct: 421 LKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAVLSIAARQKRRENADKKEDEKMD 480
Query: 178 XXXXXXXXXKMEVDEEEK---------KPTKSPNPNITVHXXXXXXXXXXXXXXXXXXXX 330
++ DEE K KP K
Sbjct: 481 VDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKE-KKKEEDKEKEAAGTSSEKDKDKE 539
Query: 331 XXXXXXXXXXPTFEILSNPARVMRQQLKVLSVVEGSGF 444
PT EIL NPARV+RQQLKVLSV++G +
Sbjct: 540 KDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSY 577
>AF312231-1|AAG33625.1| 946|Drosophila melanogaster proteosome
subunit RPN2 protein.
Length = 946
Score = 68.9 bits (161), Expect = 3e-12
Identities = 57/158 (36%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Frame = +1
Query: 10 LKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSI-AAAKARR---RAHGEGXX 177
LKMP++E KS AKPSLYAYPAPL V TAVLSI A K R + E
Sbjct: 737 LKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAVLSIAARQKRRENADKKEDEKMD 796
Query: 178 XXXXXXXXXKMEVDEEEK---------KPTKSPNPNITVHXXXXXXXXXXXXXXXXXXXX 330
++ DEE K KP K
Sbjct: 797 VDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKE-KKKEEDKEKEAAGTSSEKDKDKE 855
Query: 331 XXXXXXXXXXPTFEILSNPARVMRQQLKVLSVVEGSGF 444
PT EIL NPARV+RQQLKVLSV++G +
Sbjct: 856 KDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSY 893
>AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p110 protein.
Length = 1020
Score = 68.9 bits (161), Expect = 3e-12
Identities = 57/158 (36%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Frame = +1
Query: 10 LKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSI-AAAKARR---RAHGEGXX 177
LKMP++E KS AKPSLYAYPAPL V TAVLSI A K R + E
Sbjct: 811 LKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAVLSIAARQKRRENADKKEDEKMD 870
Query: 178 XXXXXXXXXKMEVDEEEK---------KPTKSPNPNITVHXXXXXXXXXXXXXXXXXXXX 330
++ DEE K KP K
Sbjct: 871 VDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKE-KKKEEDKEKEAAGTSSEKDKDKE 929
Query: 331 XXXXXXXXXXPTFEILSNPARVMRQQLKVLSVVEGSGF 444
PT EIL NPARV+RQQLKVLSV++G +
Sbjct: 930 KDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSY 967
>AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-PA
protein.
Length = 1020
Score = 68.9 bits (161), Expect = 3e-12
Identities = 57/158 (36%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Frame = +1
Query: 10 LKMPQLEMKSNAKPSLYAYPAPLXXXXXXXXXXVTTAVLSI-AAAKARR---RAHGEGXX 177
LKMP++E KS AKPSLYAYPAPL V TAVLSI A K R + E
Sbjct: 811 LKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAVLSIAARQKRRENADKKEDEKMD 870
Query: 178 XXXXXXXXXKMEVDEEEK---------KPTKSPNPNITVHXXXXXXXXXXXXXXXXXXXX 330
++ DEE K KP K
Sbjct: 871 VDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKE-KKKEEDKEKEAAGTSSEKDKDKE 929
Query: 331 XXXXXXXXXXPTFEILSNPARVMRQQLKVLSVVEGSGF 444
PT EIL NPARV+RQQLKVLSV++G +
Sbjct: 930 KDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSY 967
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.312 0.127 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,332,941
Number of Sequences: 53049
Number of extensions: 195061
Number of successful extensions: 256
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 256
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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