Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A01
(352 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 41 0.001
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 41 0.001
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 41 0.001
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 41 0.001
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 41 0.001
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 41 0.001
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 41 0.001
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 41 0.001
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 41 0.001
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 30 2.4
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 30 2.4
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 30 2.4
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
T+ES E+A+D++DG +LDGRELRVQMA
Sbjct: 51 TKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A ++DG LDGRELRVQ+A
Sbjct: 69 QDAEAAMDGAELDGRELRVQVA 90
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A ++DG LDGRELRVQ+A
Sbjct: 59 QDAEAAMDGAELDGRELRVQVA 80
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A ++DG LDGRELRVQ+A
Sbjct: 69 QDAEAAMDGAELDGRELRVQVA 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,059,609
Number of Sequences: 237096
Number of extensions: 630668
Number of successful extensions: 1351
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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