Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_A01
(352 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p pro... 44 4e-05
AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family sp... 44 4e-05
AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB... 44 4e-05
AE014134-2204|AAS64684.1| 112|Drosophila melanogaster CG5442-PA... 35 0.025
AE014297-3741|AAF56421.2| 807|Drosophila melanogaster CG13664-P... 27 5.1
AE014297-3328|AAN13947.1| 524|Drosophila melanogaster CG31225-P... 27 5.1
AY071760-1|AAL49382.1| 161|Drosophila melanogaster RH65675p pro... 27 6.7
AL031863-2|CAA21317.1| 161|Drosophila melanogaster EG:EG0003.8 ... 27 6.7
AE013599-2366|AAF57939.1| 161|Drosophila melanogaster CG6421-PA... 27 6.7
U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding pr... 27 8.9
AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p pro... 27 8.9
AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE... 27 8.9
AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD... 27 8.9
AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC... 27 8.9
AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB... 27 8.9
AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA... 27 8.9
>AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p
protein.
Length = 195
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
TRES E+AL+++DGRMLDGRELRVQMA
Sbjct: 60 TRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMA 99
>AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family
splicing factor SC35 protein.
Length = 195
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
TRES E+AL+++DGRMLDGRELRVQMA
Sbjct: 60 TRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMA 99
>AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB,
isoform B protein.
Length = 195
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +2
Query: 11 TRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQMA 130
TRES E+AL+++DGRMLDGRELRVQMA
Sbjct: 60 TRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMA 99
>AE014134-2204|AAS64684.1| 112|Drosophila melanogaster CG5442-PA,
isoform A protein.
Length = 112
Score = 35.1 bits (77), Expect = 0.025
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 83 LDGRMLDGRELRVQMA 130
+DGRMLDGRELRVQMA
Sbjct: 1 MDGRMLDGRELRVQMA 16
>AE014297-3741|AAF56421.2| 807|Drosophila melanogaster CG13664-PA
protein.
Length = 807
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 155 RVMRVCHNAPSVLGAPYRLTSAHQVSPG 72
RV V NAP +G PY LT + PG
Sbjct: 153 RVTDVNDNAPQWIGTPYTLTLSEVTVPG 180
>AE014297-3328|AAN13947.1| 524|Drosophila melanogaster CG31225-PA
protein.
Length = 524
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 109 GAPSTDGALWQTLITLQKQIRPQTQVPFE 195
G+ + DG +WQ +I K I Q+P E
Sbjct: 173 GSIAIDGLVWQFMIEFAKHINATLQLPIE 201
>AY071760-1|AAL49382.1| 161|Drosophila melanogaster RH65675p
protein.
Length = 161
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -3
Query: 185 TCVCGRICFCRVMRVCHNAPSVLGAPYRLTSAHQVSPGLL 66
TC+C I C +C +A +R+T + V G L
Sbjct: 37 TCICEAISGCNATAICTSAEKGACGIFRITWGYWVDAGKL 76
>AL031863-2|CAA21317.1| 161|Drosophila melanogaster EG:EG0003.8
protein.
Length = 161
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -3
Query: 185 TCVCGRICFCRVMRVCHNAPSVLGAPYRLTSAHQVSPGLL 66
TC+C I C +C +A +R+T + V G L
Sbjct: 37 TCICEAISGCNATAICTSAEKGACGIFRITWGYWVDAGKL 76
>AE013599-2366|AAF57939.1| 161|Drosophila melanogaster CG6421-PA
protein.
Length = 161
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -3
Query: 185 TCVCGRICFCRVMRVCHNAPSVLGAPYRLTSAHQVSPGLL 66
TC+C I C +C +A +R+T + V G L
Sbjct: 37 TCICEAISGCNATAICTSAEKGACGIFRITWGYWVDAGKL 76
>U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding
protein lark protein.
Length = 352
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A+ L+GR++DG+ L+VQ++
Sbjct: 133 QDAIKELNGRVVDGQPLKVQVS 154
>AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p
protein.
Length = 352
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A+ L+GR++DG+ L+VQ++
Sbjct: 133 QDAIKELNGRVVDGQPLKVQVS 154
>AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE,
isoform E protein.
Length = 352
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A+ L+GR++DG+ L+VQ++
Sbjct: 133 QDAIKELNGRVVDGQPLKVQVS 154
>AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD,
isoform D protein.
Length = 352
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A+ L+GR++DG+ L+VQ++
Sbjct: 133 QDAIKELNGRVVDGQPLKVQVS 154
>AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC,
isoform C protein.
Length = 352
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A+ L+GR++DG+ L+VQ++
Sbjct: 133 QDAIKELNGRVVDGQPLKVQVS 154
>AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB,
isoform B protein.
Length = 352
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A+ L+GR++DG+ L+VQ++
Sbjct: 133 QDAIKELNGRVVDGQPLKVQVS 154
>AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA,
isoform A protein.
Length = 352
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +2
Query: 65 EEALDSLDGRMLDGRELRVQMA 130
++A+ L+GR++DG+ L+VQ++
Sbjct: 133 QDAIKELNGRVVDGQPLKVQVS 154
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,577,093
Number of Sequences: 53049
Number of extensions: 177330
Number of successful extensions: 419
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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