Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_P24
(563 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.8
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 23 2.8
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 4.9
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 4.9
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 22 4.9
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 4.9
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 4.9
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 4.9
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 4.9
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 8.6
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 355 NNYEITNNNTQLLVFNN 305
NNY NNN + L NN
Sbjct: 87 NNYNYNNNNYKKLYCNN 103
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 355 NNYEITNNNTQLLVFNN 305
NNY NNN + L NN
Sbjct: 87 NNYNYNNNNYKKLYCNN 103
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 355 NNYEITNNNTQLLVFNN 305
NNY NNN + L NN
Sbjct: 87 NNYNYNNNNYKKLYCNN 103
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 244 SLHYMNTENMVTNQY 200
+L+Y+NTE V +QY
Sbjct: 272 NLNYVNTEQFVKSQY 286
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.8 bits (44), Expect = 4.9
Identities = 11/52 (21%), Positives = 22/52 (42%)
Frame = -2
Query: 361 TQNNYEITNNNTQLLVFNNCSIFEY*NRFIFILYSNTYISLHYMNTENMVTN 206
T E+ + Q + N ++ N+ I+Y N S H +++ + N
Sbjct: 181 TTGKGELVSLTVQAMDSTNTMVYMVDNKNTLIIYQNADDSFHRLSSHTLNHN 232
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 485 IIRNNPRQILNCTSPVGEC 541
I+ N+P QI N +PV +C
Sbjct: 345 IVLNHPGQISNGYTPVLDC 363
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 485 IIRNNPRQILNCTSPVGEC 541
I+ N+P QI N +PV +C
Sbjct: 56 IVLNHPGQISNGYTPVLDC 74
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 244 SLHYMNTENMVTNQY 200
SL+Y+NTE T+ Y
Sbjct: 274 SLYYVNTEQFRTSDY 288
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 244 SLHYMNTENMVTNQY 200
SL+Y+NTE T+ Y
Sbjct: 274 SLYYVNTEQFRTSDY 288
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 485 IIRNNPRQILNCTSPVGEC 541
I+ N+P QI N +PV +C
Sbjct: 345 IVLNHPGQISNGYTPVLDC 363
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 244 SLHYMNTENMVTNQY 200
SL+Y+NTE T+ Y
Sbjct: 274 SLYYVNTEQFRTSDY 288
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 200 FINMYR*HESNYCNTNSQYEIFKSFFN 120
++NM +S Y N +YE + FN
Sbjct: 278 YVNMEPFMKSQYEENNIEYEGIQDIFN 304
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,631
Number of Sequences: 438
Number of extensions: 4454
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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