Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_P22
         (564 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    26   0.74 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   2.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.1  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   9.1  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 26.2 bits (55), Expect = 0.74
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 147 SEKTNITYKRGLRNGLNCCVVN 212
           S+ TN+T   G+RNGLN    N
Sbjct: 531 SDATNLTPSAGVRNGLNHACTN 552


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +3

Query: 177 GLRNGL--NCCVVNLVRCWGSVLVKQKLTYKFIWTYCECVL 293
           G RN +  NCC    +    ++L+++K  Y F      CVL
Sbjct: 187 GKRNEIYYNCCPEPYIDITFAILIRRKTLYYFFNLIVPCVL 227


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 227  PTSHKVNNTTV*SISQST 174
            PT H VN+T V SI+ S+
Sbjct: 956  PTEHSVNSTNVTSINSSS 973


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 250 FCLTKTLPQHRTRLTTQQFSPF 185
           FCLT+T P  +  +   ++ PF
Sbjct: 94  FCLTRTNPLRKLCIAIVEWKPF 115


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +3

Query: 177 GLRNGL--NCCVVNLVRCWGSVLVKQKLTYKFIWTYCECVL 293
           G RN +  NCC    +    +++++++  Y F      CVL
Sbjct: 219 GKRNEIYYNCCPEPYIDITFAIIIRRRTLYYFFNLIVPCVL 259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,681
Number of Sequences: 2352
Number of extensions: 12070
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)