Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_P22
         (564 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              23   2.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   4.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   6.5  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   8.6  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   8.6  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 261 KFIWTYCECVLKRLSL 308
           K +  YCEC+LK  ++
Sbjct: 57  KKVQLYCECILKNFNI 72


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = +3

Query: 177 GLRNGL--NCCVVNLVRCWGSVLVKQKLTYKFIWTYCECVL 293
           G RN +  NCC    +     V+++++  Y F      CVL
Sbjct: 204 GKRNEIYYNCCPEPYIDITFVVIIRRRTLYYFFNLIVPCVL 244


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 231 SVLVKQKLTYKFIWTYCECVLKRL 302
           SV    K+TY  +W  C  +  R+
Sbjct: 91  SVEPDSKVTYSGLWRVCVAISSRM 114


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 19  LSNEQTIIIEEYLVFVDPRGVICC*NEQNTFRCEV 123
           + N + I++EEY+  V+     C     +T  CEV
Sbjct: 93  VKNARMILLEEYIPRVESVVETCKKEVTSTEGCEV 127


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 19  LSNEQTIIIEEYLVFVDPRGVICC*NEQNTFRCEV 123
           + N + I++EEY+  V+     C     +T  CEV
Sbjct: 67  VKNARMILLEEYIPRVESVVETCKKEVTSTEGCEV 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,482
Number of Sequences: 438
Number of extensions: 3584
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)