Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_P19
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 244 3e-65
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.2
Z77652-7|CAB01119.1| 341|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 29 2.2
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 28 5.1
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 28 5.1
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 28 5.1
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 28 5.1
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 28 5.1
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 28 5.1
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 28 5.1
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical pr... 28 5.1
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 28 5.1
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 5.1
AL117206-1|CAB60446.1| 644|Caenorhabditis elegans Hypothetical ... 27 6.7
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 27 6.7
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.9
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 244 bits (597), Expect = 3e-65
Identities = 107/162 (66%), Positives = 138/162 (85%)
Frame = +3
Query: 63 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 242
M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RGH+ +LMGKNTM
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60
Query: 243 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 422
+RKA++ HL NP+LEKLLPHI NVGFVFT+ DL ++R KLLEN+ APA+ GAIAP
Sbjct: 61 IRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCD 120
Query: 423 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILE 548
V +P NTG+GPEKTSFFQAL IPTKI++GTIEI+NDVH+++
Sbjct: 121 VKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIK 162
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 50.0 bits (114), Expect = 1e-06
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Frame = +3
Query: 57 SKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKN 236
+K+ ++ K T K+N ++ +D+Y FI N+ S + IR + +S GKN
Sbjct: 13 TKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKN 71
Query: 237 TMMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 410
++ A+ A L K +KG G +FT +V + E + AR G +
Sbjct: 72 NVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDV 131
Query: 411 APLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHI 542
A +VV+P + + L +PTK+ KG I + +
Sbjct: 132 ATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEV 176
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 141 CFIVGAD--NVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKG 314
C G D + GS + + R + GH+ +L + + ++DH+++ ++K+ +
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKVYNCLCC 240
Query: 315 NVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 425
N F+ + L+ L+ + RPG + PL++
Sbjct: 241 NWTFL-NQVHLIS-HKTCLKQTGKPCCRPGHMEPLAI 275
>Z77652-7|CAB01119.1| 341|Caenorhabditis elegans Hypothetical
protein C06B3.10 protein.
Length = 341
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -2
Query: 377 VLQQFITHI-NKISTGEDKANISLDVRKQFFESWICFKMVLDGFPHHGVFAHEHNAVTTQ 201
++ F+ HI + IS NIS++ Q I LD P+ + NA+ TQ
Sbjct: 254 IIPVFLMHIPSTISMCAAFTNISIEFISQILSCTISLYPALDPLPNFFIIKSYRNAI-TQ 312
Query: 200 *NTDLLHLL 174
TD L LL
Sbjct: 313 YLTDFLRLL 321
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 141 CFIVGAD--NVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKG 314
C G D + GS + + R + GH+ +L + + ++DH+++ ++K+ +
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKVYNCLCC 240
Query: 315 NVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 425
N F+ + L+ L+ + RPG + PL++
Sbjct: 241 NWTFL-NQVHLIS-HKTCLKQTGKPCCRPGHMEPLAI 275
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 212 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 313
+H H Q HH HQ PS N SS ASS G
Sbjct: 369 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 404
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 212 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 313
+H H Q HH HQ PS N SS ASS G
Sbjct: 346 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 212 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 313
+H H Q HH HQ PS N SS ASS G
Sbjct: 531 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 566
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 212 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 313
+H H Q HH HQ PS N SS ASS G
Sbjct: 390 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 425
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 212 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 313
+H H Q HH HQ PS N SS ASS G
Sbjct: 254 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 289
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 212 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 313
+H H Q HH HQ PS N SS ASS G
Sbjct: 369 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 404
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 212 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 313
+H H Q HH HQ PS N SS ASS G
Sbjct: 346 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 212 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 313
+H H Q HH HQ PS N SS ASS G
Sbjct: 531 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 566
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 212 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 313
+H H Q HH HQ PS N SS ASS G
Sbjct: 390 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 425
>Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical
protein T23G5.1 protein.
Length = 788
Score = 27.9 bits (59), Expect = 5.1
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 5/158 (3%)
Frame = +3
Query: 81 ATWKSNYFVKIIQLLDEYP---KCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRK 251
A W + F+K ++ E+ C G D+ ++ + + V + T+ +
Sbjct: 337 ALWIPDLFMKRVEKDQEWSLMCPCECPGLDDCWGEEFEALYAKYEAEGRV---RKTVKAR 393
Query: 252 AIKDHLETNPALEKLLPHI--KGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 425
+ +H+ +N +E LP+I K + +L ++ L ++ + P IA ++
Sbjct: 394 KLWEHIVSNQ-IETGLPYITYKDAANRKSNQQNLGTIKCSNLCTEIIEYSAPDEIAVCNL 452
Query: 426 VIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVH 539
A N + PEK F L+ TK+ + I DV+
Sbjct: 453 ASIALNRYVTPEKKFDFVKLAEVTKVITRNLNKIIDVN 490
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 366 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 515
+L +Q A A+ L+ +P TGL P + FQAL P I+ T
Sbjct: 42 VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 427 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPT 317
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>AL117206-1|CAB60446.1| 644|Caenorhabditis elegans Hypothetical
protein Y67A10A.1 protein.
Length = 644
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -2
Query: 380 FVLQQFITHINKISTGEDKANISLDVRKQFFESWICFKMVLDGFPH-HGVFAH--EHNAV 210
F++ +++ +I +DK ++ +E ++ +LD FP H F + H AV
Sbjct: 494 FIVARYMNNIKNPVQKDDKIVQQINETIAHYEKYVKKLYILDAFPEFHENFLNLFLHYAV 553
Query: 209 TTQ*NTDLLHL 177
T + D LHL
Sbjct: 554 TRPDDMDALHL 564
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 536 DIIDNFNSTL*NLSGDGKSLEERSLLRTKA-SVMSGNDDRQWSN 408
D + F+ ++ +L G+G L ERSL TKA +M +W N
Sbjct: 457 DTVSLFSPSILSLHGEGTDL-ERSLSLTKALRLMEDTGQEEWMN 499
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 221 AHGQKHHDEESHQGPS*NKSSSRKTASS 304
+HG+KHH + + S + SSS ++SS
Sbjct: 329 SHGKKHHKKAASSSSSSSSSSSSSSSSS 356
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 477 GRKKSSQDQGQCYERE*RQTMEQWLQDE 394
GRKK ++ QC +RE R EQ DE
Sbjct: 424 GRKKREAERDQCLKREKRYADEQCDNDE 451
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,859,284
Number of Sequences: 27780
Number of extensions: 302550
Number of successful extensions: 881
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -