Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_P16
         (503 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    23   2.4  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    23   2.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.6  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -3

Query: 342 VNICKR*KKETDRVTIGWHSWQCLGSQNREL 250
           V  CK+    T+   + W   +C+   ++EL
Sbjct: 112 VETCKKEVTSTEGCEVAWQFGKCIYENDKEL 142


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -3

Query: 342 VNICKR*KKETDRVTIGWHSWQCLGSQNREL 250
           V  CK+    T+   + W   +C+   ++EL
Sbjct: 86  VETCKKEVTSTEGCEVAWQFGKCIYENDKEL 116


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 92  MVCHCGQQYFGH 57
           M CH G  ++GH
Sbjct: 272 MFCHTGLGHYGH 283


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,128
Number of Sequences: 438
Number of extensions: 2886
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)