Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_P15
(574 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 185 2e-47
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 58 4e-09
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 54 1e-07
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 54 1e-07
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 51 7e-07
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 51 7e-07
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 44 8e-05
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 41 5e-04
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 41 7e-04
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 38 0.004
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 38 0.007
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 34 0.062
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 34 0.082
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 33 0.14
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 32 0.25
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 32 0.33
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 31 0.44
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 31 0.58
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 31 0.58
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 30 1.0
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 29 2.3
AC090999-9|AAK26153.1| 41|Caenorhabditis elegans Hypothetical ... 29 2.3
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 3.1
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 3.1
AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical ... 29 3.1
U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF047651-5|AAC02722.2| 702|Caenorhabditis elegans Germline-enha... 28 5.4
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 27 7.2
Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical pr... 27 9.5
AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and inte... 27 9.5
AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and inte... 27 9.5
AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and inte... 27 9.5
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 185 bits (451), Expect = 2e-47
Identities = 82/136 (60%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Frame = +2
Query: 116 VVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLK 295
V VPRNFRLLEELE+GQKG GDG ISWGLE D DMTLT WT IIGPPRTPYE+R+Y+L+
Sbjct: 2 VDVPRNFRLLEELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQ 61
Query: 296 IECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRR-L 472
I+C YP EPPT RF ++++M VN G++D R + L W Y IKTVL+++R+ +
Sbjct: 62 IQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRNWSNSYMIKTVLEDIRKNM 121
Query: 473 MTLKENMKLSQPPEGS 520
M KEN+KL QP EG+
Sbjct: 122 MMAKENLKLQQPAEGA 137
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 58.0 bits (134), Expect = 4e-09
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +2
Query: 224 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQ 403
LT G I GPP TPY M+ L I+ +YP PP +F ++I V+SQTG++
Sbjct: 36 LTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVI---C 92
Query: 404 VPILA-RWQRDYTIKTVLQELRRLMTLKE 487
+ IL +W T++TVL ++ LM E
Sbjct: 93 LDILKDQWAASLTLRTVLLSIQALMCTPE 121
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +2
Query: 116 VVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLK 295
+ P RL+ + ++ Q+ G G ++D++ LT W +I GP TP+E+ + L
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVS--GAPTEDNI-LT-WEAIIFGPQETPFEDGTFKLS 56
Query: 296 IECDTRYPDEPPTARFISRI-NMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRRL 472
+E YP++PPT +FIS++ + N + +D Q RW Y + +L ++ L
Sbjct: 57 LEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQ----NRWSPTYDVAAILTSIQSL 112
Query: 473 M 475
+
Sbjct: 113 L 113
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +2
Query: 116 VVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLK 295
+ P RL+ + ++ Q+ G G ++D++ LT W +I GP TP+E+ + L
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVS--GAPTEDNI-LT-WEAIIFGPQETPFEDGTFKLS 56
Query: 296 IECDTRYPDEPPTARFISRI-NMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRRL 472
+E YP++PPT +FIS++ + N + +D Q RW Y + +L ++ L
Sbjct: 57 LEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQ----NRWSPTYDVAAILTSIQSL 112
Query: 473 M 475
+
Sbjct: 113 L 113
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 50.8 bits (116), Expect = 7e-07
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 224 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQ 403
L HW I+GPP +PY+ ++ L I T YP +PP F +RI +NS +
Sbjct: 30 LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC---- 85
Query: 404 VPIL-ARWQRDYTIKTVLQELRRLM 475
+ IL ++W TI VL + L+
Sbjct: 86 LDILRSQWSPALTISKVLLSICSLL 110
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 50.8 bits (116), Expect = 7e-07
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 224 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQ 403
L HW I+GPP +PY+ ++ L I T YP +PP F +RI +NS +
Sbjct: 30 LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC---- 85
Query: 404 VPIL-ARWQRDYTIKTVLQELRRLM 475
+ IL ++W TI VL + L+
Sbjct: 86 LDILRSQWSPALTISKVLLSICSLL 110
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 179 DGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 355
DG S GL D+D + W ++IGPP T YE + ++ YP +PP +FIS I
Sbjct: 21 DG-FSAGLVDDND--IYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEI 76
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Frame = +2
Query: 233 WTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI-NMN-------CVNSQTGL 388
WT I GPP+T Y+ + I + YP PP+ +F +++ + N C++
Sbjct: 42 WTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSP 101
Query: 389 VDNRQVPILA--RWQRDYTIKTVLQELRRLM 475
+D+ Q LA RW +++T+L + L+
Sbjct: 102 IDDPQSGELACERWNPTQSVRTILLSVISLL 132
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 40.7 bits (91), Expect = 7e-04
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Frame = +2
Query: 239 GMIIGPPRTPYENRMYSLKIECDTRYPDEPP---------------TARFISRINMNCVN 373
G I GP TPY + +K++ YP EPP A+F++RI ++
Sbjct: 55 GFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNIS 114
Query: 374 SQTGLVDNRQVPILA-RWQRDYTIKTVLQELRRLMTLKE 487
SQTG + + IL +W T++TVL L+ ++ E
Sbjct: 115 SQTGTI---CLDILKDKWTASLTLRTVLLSLQAMLCSPE 150
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +2
Query: 215 DMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVD 394
+ + W +IIG P+TPYE +Y K+ +P +PP ++ N++ L
Sbjct: 34 ETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTPNGRFQTNTRLCLSI 93
Query: 395 NRQVPILARWQRDYTIKTVLQELRRLM 475
+ P W +T+ T++ L M
Sbjct: 94 SDYHP--DTWNPAWTVSTIITGLMSFM 118
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 239 GMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 355
G+I G TPYE ++ L I+ YP + PT +FI++I
Sbjct: 383 GIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKI 421
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 34.3 bits (75), Expect = 0.062
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 242 MIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQV--PIL 415
+I GP TPY N ++ I T YP PP F++ + N V L ++ ++ IL
Sbjct: 448 LISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGN-VRFNPNLYNDGKICLSIL 506
Query: 416 ARWQ 427
W+
Sbjct: 507 GTWE 510
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 33.9 bits (74), Expect = 0.082
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 251 GPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLV 391
GP T YEN ++ ++++ +YP + P+ F+++I ++ +G V
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTV 87
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +2
Query: 137 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 316
RL+ E ++ +G I+ ++ D+ W +I GP T + N ++ +I Y
Sbjct: 8 RLMTEYKELTTRPPEGIIAAPIDEDN---FFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 317 PDEPPTARF 343
P PP RF
Sbjct: 65 PLSPPKMRF 73
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 32.3 bits (70), Expect = 0.25
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 212 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLV 391
D+ ++ MI GP +P+ ++ L++ YP P RF+++I ++ + G +
Sbjct: 29 DESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNID-KLGRI 87
Query: 392 DNRQVPILA-RWQRDYTIKTVLQELRRLMT 478
+ IL +W I+TVL ++ L++
Sbjct: 88 ---CLDILKDKWSPALQIRTVLLSIQALLS 114
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 191 SWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKI 298
S G DD L HW I+GPP +PY+ ++ L I
Sbjct: 22 STGSVGDD---LYHWQATIMGPPESPYQGGIFFLTI 54
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 245 IIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNC-VNSQTGLV 391
I GP TPYE ++ + + YP+ P +F + I NC V TG V
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLI-WNCAVEPSTGQV 83
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 176 GDGTISWGLESDDDMTLTH 232
GDGTI W LES D MT H
Sbjct: 485 GDGTIGWVLESMDKMTFPH 503
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 212 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 355
++ L WT ++I P + PY + + I YP +PP F ++I
Sbjct: 28 EETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKI 74
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/70 (24%), Positives = 31/70 (44%)
Frame = +2
Query: 137 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 316
RL++EL Q + +G + + +D L W ++G T Y ++ L+ +Y
Sbjct: 8 RLMKELAQLKSEAPEGLLVDNTSTSND--LKQWKIGVVGAEGTLYAGEVFMLQFTFGPQY 65
Query: 317 PDEPPTARFI 346
P P F+
Sbjct: 66 PFNSPEVMFV 75
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = +2
Query: 269 YENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKT 448
Y+N +++L ++ + YP +PP +F + V+ T + + + + W+ + T++
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPML-LQENWKPETTMED 115
Query: 449 VLQELRRLMTLKENMKLSQP 508
V L L+ L LS+P
Sbjct: 116 V---LLNLIVLLNEPDLSRP 132
>AC090999-9|AAK26153.1| 41|Caenorhabditis elegans Hypothetical
protein Y82E9BR.5 protein.
Length = 41
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 451 NCLDSVITLPSCKDWNLPIINKSSLTV 371
NCL I LP+C W+ P + +++L+V
Sbjct: 7 NCLKICIQLPNCNTWSFP-VKRATLSV 32
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 203 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCV 370
+ D++ L G PR +N+++ KI+C + + + P F+ R C+
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACI 111
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 203 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCV 370
+ D++ L G PR +N+++ KI+C + + + P F+ R C+
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACI 111
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 203 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCV 370
+ D++ L G PR +N+++ KI+C + + + P F+ R C+
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACI 111
>AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical
protein Y48G9A.10 protein.
Length = 722
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 131 NFRLLEELEQGQKGVGDGTISWGLESDDDMTL 226
N +LLE +E Q + T WG+E+ D M++
Sbjct: 358 NKKLLEVIETSQYVISMDTAKWGVETSDKMSV 389
>U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical
protein F13H8.3 protein.
Length = 374
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -1
Query: 373 VDTVHIDSRNKTSCRWLIRITSITFNFKRIHSIFIRSPGGTNYHASPMSKSHVI 212
VD S NK WL + +N KR++ + IR+ ++ S + ++I
Sbjct: 317 VDRAFKTSSNKNDANWLSQTFVTEYNVKRVNEMLIRAVKLSDQSTSSKLQDNII 370
>AF047651-5|AAC02722.2| 702|Caenorhabditis elegans
Germline-enhanced at-hook proteinprotein 1 protein.
Length = 702
Score = 27.9 bits (59), Expect = 5.4
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 269 YENRMYSLKIECD-TRYPDEPPTARFISRINMNCVNSQ--TGLVDNRQVPIL-ARWQRDY 436
++ ++KI D TR PD PP ISR N D+ + L +R+QR
Sbjct: 182 FDEEEEAIKIMADPTRPPDLPPQRSLISRFESNRTKRDIFRNSYDSDEEEFLRSRYQRAV 241
Query: 437 TIKTVLQELRRLMTLKENMKLSQPPEG 517
T +L+ R+ + +E+ +S+P EG
Sbjct: 242 TPPPILE--RQSGSTRES--VSEPSEG 264
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 436 VITLPSCKDWNLPIINKSSLTVDTV 362
V+T P+ WNL IIN+S TV ++
Sbjct: 2803 VVTSPANSTWNLRIINESPETVKSL 2827
>Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical
protein F13B10.1e protein.
Length = 801
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 146 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 325
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 447 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 503
Query: 326 PPTARFI 346
F+
Sbjct: 504 SNLDNFL 510
>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical
protein F13B10.1c protein.
Length = 1000
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 146 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 325
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 630 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 686
Query: 326 PPTARFI 346
F+
Sbjct: 687 SNLDNFL 693
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 146 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 325
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 235 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 291
Query: 326 PPTARFI 346
F+
Sbjct: 292 SNLDNFL 298
>Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical
protein F13B10.1a protein.
Length = 930
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 146 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 325
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 576 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 632
Query: 326 PPTARFI 346
F+
Sbjct: 633 SNLDNFL 639
>AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform f protein.
Length = 589
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 146 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 325
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 235 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 291
Query: 326 PPTARFI 346
F+
Sbjct: 292 SNLDNFL 298
>AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform c protein.
Length = 984
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 146 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 325
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 630 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 686
Query: 326 PPTARFI 346
F+
Sbjct: 687 SNLDNFL 693
>AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform a protein.
Length = 931
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 146 EELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDE 325
E +E+ K + DG + L +D L H GMI G R + + +LK+ D DE
Sbjct: 577 EYVEKFAKQMVDGDLLLQLTEND---LKHDVGMISGLHRKRFLRELQTLKVAADYSSVDE 633
Query: 326 PPTARFI 346
F+
Sbjct: 634 SNLDNFL 640
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,263,669
Number of Sequences: 27780
Number of extensions: 231487
Number of successful extensions: 544
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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