Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_P15
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   0.53 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.93 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.93 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   3.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   8.7  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 365 CVNSQTGL-VDNRQVPILARWQRDYT 439
           C  S+T L   NR++P  A W++D T
Sbjct: 378 CFKSRTNLDPSNRKLPAPANWKKDTT 403


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 431 DYTIKTVLQELRRLMTLKENMKLSQPPEGSTX*FISMEIFSLDPIY 568
           D T  TVL+    L  LK+ +++   P       ++ E  S+ PI+
Sbjct: 108 DITYPTVLEVQLNLPILKDGVQIFIAPNNGAVKVLANEFLSILPIF 153


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 431 DYTIKTVLQELRRLMTLKENMKLSQPPEGSTX*FISMEIFSLDPIY 568
           D T  TVL+    L  LK+ +++   P       ++ E  S+ PI+
Sbjct: 146 DITYPTVLEVQLNLPILKDGVQIFIAPNNGAVKVLANEFLSILPIF 191


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = +2

Query: 254 PPRTPYENRMYSLK---IECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILAR 421
           PP+ P   ++ S     IE  T  PD+P ++   S     C + ++   +   +P+L R
Sbjct: 565 PPQCPRFRKLDSPSDSGIESGTEKPDKPASSSASSAPTSVCSSPRSEDKEVEDMPVLKR 623


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 397 IINKSSLTVDTVHIDSRNKTSCRWL 323
           +IN + L + +  +     TSC+WL
Sbjct: 10  LINAAFLCLASTILSESAGTSCKWL 34


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,677
Number of Sequences: 438
Number of extensions: 2923
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)