Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_P12
(430 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 100 2e-23
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 47 2e-07
Z69980-1|CAA93820.1| 134|Anopheles gambiae GTP-binding protein ... 46 8e-07
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 3.5
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 23 4.6
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 23 4.6
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 23 4.6
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 23 4.6
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 23 4.6
AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding pr... 23 6.1
AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding pr... 23 6.1
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 100 bits (240), Expect = 2e-23
Identities = 47/81 (58%), Positives = 56/81 (69%)
Frame = +1
Query: 187 KLVIVGDGACGKTCLLIVFSKDQFPESCTCRETSCFENYVADIEVDGKQVELALWDTAGQ 366
K V+VGDG GKTC+LI ++ D FP + F+NY A + VDG QV L LWDTAGQ
Sbjct: 8 KCVVVGDGTVGKTCMLISYTTDSFPGEYV---PTSFDNYSAPMVVDGVQVSLGLWDTAGQ 64
Query: 367 EDYDRLLTLSYPDTDVILMCF 429
EDYDRL LSYP TDV L+C+
Sbjct: 65 EDYDRLRPLSYPQTDVFLICY 85
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 47.2 bits (107), Expect = 2e-07
Identities = 26/81 (32%), Positives = 41/81 (50%)
Frame = +1
Query: 187 KLVIVGDGACGKTCLLIVFSKDQFPESCTCRETSCFENYVADIEVDGKQVELALWDTAGQ 366
KLV++G+ A GK+ L++ F K QF E + F + +D V+ +WDTAGQ
Sbjct: 26 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF--LTQTLCIDDTTVKFEIWDTAGQ 83
Query: 367 EDYDRLLTLSYPDTDVILMCF 429
E Y L + Y ++ +
Sbjct: 84 ERYHSLAPMYYRGAQAAIVVY 104
>Z69980-1|CAA93820.1| 134|Anopheles gambiae GTP-binding protein
protein.
Length = 134
Score = 45.6 bits (103), Expect = 8e-07
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1
Query: 355 TAGQEDYDRLLTLSYPDTDVILMCF 429
+AGQEDYDRL LSYP TDV L+CF
Sbjct: 1 SAGQEDYDRLRPLSYPQTDVFLVCF 25
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.4 bits (48), Expect = 3.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 306 SRHRGGWETGGTSAVGYGRXRGLRQAADAVI 398
S+H GG +GG G G+ +G+ + A I
Sbjct: 2052 SQHGGGSISGGGGTPGGGKSKGIIGSTQANI 2082
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 4.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 268 CTCRETSCFENYVAD 312
CTC SCF+++ D
Sbjct: 2 CTCGTCSCFDSWSGD 16
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 4.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 268 CTCRETSCFENYVAD 312
CTC SCF+++ D
Sbjct: 2 CTCGTCSCFDSWSGD 16
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 4.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 268 CTCRETSCFENYVAD 312
CTC SCF+++ D
Sbjct: 2 CTCGTCSCFDSWSGD 16
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 4.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 268 CTCRETSCFENYVAD 312
CTC SCF+++ D
Sbjct: 2 CTCGTCSCFDSWSGD 16
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 23.0 bits (47), Expect = 4.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 268 CTCRETSCFENYVAD 312
CTC SCF+++ D
Sbjct: 578 CTCGTCSCFDSWSGD 592
>AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP34 protein.
Length = 311
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = +1
Query: 283 TSCFENYVADIEVDGKQVELALWDTAGQEDYDRLLTLSYPDTDVI 417
++ ++YV + + Q E A + +D R + YPD + +
Sbjct: 34 SASLQHYVVEKSFNQAQAECAEYQGVHDDDLLRYVKEGYPDVEEV 78
>AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP37 protein.
Length = 311
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = +1
Query: 283 TSCFENYVADIEVDGKQVELALWDTAGQEDYDRLLTLSYPDTDVI 417
++ ++YV + + Q E A + +D R + YPD + +
Sbjct: 34 SASLQHYVVEKSFNQAQAECAEYQGVHDDDLLRYVKEGYPDVEEV 78
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,119
Number of Sequences: 2352
Number of extensions: 9697
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -