Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_P10
         (513 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009967-1|AAQ22436.1| 1034|Drosophila melanogaster RE65864p pro...    29   2.8  
AJ441108-1|CAD29584.1| 1030|Drosophila melanogaster SMC5 protein...    29   2.8  
AE014296-3580|AAF51749.2|  735|Drosophila melanogaster CG32438-P...    29   2.8  
AE014296-3579|AAN12180.2|  992|Drosophila melanogaster CG32438-P...    29   2.8  
AE014296-3578|AAN12179.2| 1025|Drosophila melanogaster CG32438-P...    29   2.8  

>BT009967-1|AAQ22436.1| 1034|Drosophila melanogaster RE65864p
           protein.
          Length = 1034

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 280 ILQRIDVSIIYLAPLERLQYSP 345
           + Q++ V++IY AP +RL YSP
Sbjct: 495 VKQKLGVNVIYCAPSDRLVYSP 516


>AJ441108-1|CAD29584.1| 1030|Drosophila melanogaster SMC5 protein
           protein.
          Length = 1030

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 280 ILQRIDVSIIYLAPLERLQYSP 345
           + Q++ V++IY AP +RL YSP
Sbjct: 480 VKQKLGVNVIYCAPSDRLVYSP 501


>AE014296-3580|AAF51749.2|  735|Drosophila melanogaster CG32438-PA,
           isoform A protein.
          Length = 735

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 280 ILQRIDVSIIYLAPLERLQYSP 345
           + Q++ V++IY AP +RL YSP
Sbjct: 462 VKQKLGVNVIYCAPSDRLVYSP 483


>AE014296-3579|AAN12180.2|  992|Drosophila melanogaster CG32438-PB,
           isoform B protein.
          Length = 992

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 280 ILQRIDVSIIYLAPLERLQYSP 345
           + Q++ V++IY AP +RL YSP
Sbjct: 462 VKQKLGVNVIYCAPSDRLVYSP 483


>AE014296-3578|AAN12179.2| 1025|Drosophila melanogaster CG32438-PD,
           isoform D protein.
          Length = 1025

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 280 ILQRIDVSIIYLAPLERLQYSP 345
           + Q++ V++IY AP +RL YSP
Sbjct: 495 VKQKLGVNVIYCAPSDRLVYSP 516


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,658,939
Number of Sequences: 53049
Number of extensions: 355857
Number of successful extensions: 604
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)