Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_P08
         (536 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.6  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   6.0  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   8.0  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   8.0  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 306 WFFIIHICLTLRTCD 350
           W F IH+C    TCD
Sbjct: 102 WIFGIHLCKLWLTCD 116


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 306 WFFIIHICLTLRTCD 350
           W F IH+C    TCD
Sbjct: 102 WIFGIHLCKLWLTCD 116


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 306 WFFIIHICLTLRTCD 350
           W F IH+C    TCD
Sbjct: 102 WIFGIHLCKLWLTCD 116


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 262 NQNSGFINKFLCTAHT 215
           + N GF+N  +CT+ T
Sbjct: 623 DSNMGFLNNSMCTSTT 638


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 77  YPKKRVLKMSVVS 115
           +PKKRV KMS ++
Sbjct: 222 WPKKRVTKMSSIN 234


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -1

Query: 227 HCSHFCL 207
           HCSH CL
Sbjct: 42  HCSHLCL 48


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -1

Query: 227 HCSHFCL 207
           HCSH CL
Sbjct: 42  HCSHLCL 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,552
Number of Sequences: 438
Number of extensions: 3372
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)