Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_P06
         (196 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132159-1|AAD34747.1|  823|Drosophila melanogaster unknown prot...    27   4.8  
AE014298-1970|AAF48327.1|  823|Drosophila melanogaster CG11092-P...    27   4.8  
AE013599-2058|AAM70970.1|  119|Drosophila melanogaster CG30472-P...    27   4.8  
L07958-1|AAB41352.1|  357|Drosophila melanogaster NAD-dependent ...    26   8.4  

>AF132159-1|AAD34747.1|  823|Drosophila melanogaster unknown
           protein.
          Length = 823

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 100 FSDYYYISVLRAQFVLFTNNHFI 32
           F D+Y+   LR+   + TNNH I
Sbjct: 698 FFDHYHEGALRSALEILTNNHLI 720


>AE014298-1970|AAF48327.1|  823|Drosophila melanogaster CG11092-PA
           protein.
          Length = 823

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 100 FSDYYYISVLRAQFVLFTNNHFI 32
           F D+Y+   LR+   + TNNH I
Sbjct: 698 FFDHYHEGALRSALEILTNNHLI 720


>AE013599-2058|AAM70970.1|  119|Drosophila melanogaster CG30472-PA
           protein.
          Length = 119

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 102 FSQIIIIFPSCVLNLYFLLTIISLISR 22
           F+Q  +I PS  L  YF L + SLI +
Sbjct: 62  FAQTFLIVPSLTLEGYFTLIVASLICK 88


>L07958-1|AAB41352.1|  357|Drosophila melanogaster NAD-dependent
           methylenetetrahydrofolatedehydrogenase-
           methenyltetrahydrofolate cyclohydrolaseprotein.
          Length = 357

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 55  VQIEHARRKYNNNLRKFVTIMSIYEII*FKLSVETIRT 168
           VQ E + RK +   +K VTI ++ +II  K   + +RT
Sbjct: 33  VQFEFSTRKISQKPQKEVTISNMAQIIDGKAIAQEVRT 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,282,771
Number of Sequences: 53049
Number of extensions: 101088
Number of successful extensions: 271
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 24,988,368
effective HSP length: 44
effective length of database: 22,654,212
effective search space used: 453084240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)