Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_P04
         (467 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   0.43 
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    27   0.43 
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    26   0.57 
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    26   0.57 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   1.7  
Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related prot...    23   4.0  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   5.3  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.0  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   7.0  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 26.6 bits (56), Expect = 0.43
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = +1

Query: 76   NLRNTEIFT--FIYEVTCN-I*NMSTDHIMNVIIK-IEPKEETSNEE-DNDLGNYEQKIF 240
            N  N E FT     EVT N + N+ T+++     + ++  +E S E+    L N   ++ 
Sbjct: 808  NQENKEAFTSRMSLEVTKNKLENLLTNNLFRRKDELVQALQEISVEDRKRQLTNCRNEVV 867

Query: 241  ATEKRIKEERID 276
            ATEKRIK+   D
Sbjct: 868  ATEKRIKKVLTD 879


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 26.6 bits (56), Expect = 0.43
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 46  IYYGEFMKINNLRNTEIFTFIYEVTCN 126
           + YG+   +++L + E F+FI ++ CN
Sbjct: 59  VAYGKINDVSSLSSIERFSFIKQIQCN 85


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 26.2 bits (55), Expect = 0.57
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 220 NYEQKIFATEKRIKEERIDYNISWSPPD 303
           N + +I  T   +++E  DY + W+P D
Sbjct: 64  NLKNQIMTTNVWVEQEWNDYKLKWNPDD 91


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 26.2 bits (55), Expect = 0.57
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 230 RKYLPLRRELKKNVLITTYLGLHQIQLIRNLHSLVT 337
           RKY     EL   +++ T+L      L+RNLH  +T
Sbjct: 207 RKYGNKAFELNTMIMMKTFLASSYPTLVRNLHMKIT 242


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 286 SWSPPDSADQESSLPCDSGQPWPFVKIEE 372
           +W P  S+++E   P D   PW  V I E
Sbjct: 457 NW-PSISSEEEQEQPADQQTPWTQVTIPE 484


>Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related
           protease protein.
          Length = 273

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +2

Query: 320 LHSLVTVGNHGHS*K*KNKEFEQLETDSALKIEDNPYTESIDIRPD 457
           LH +  V + GHS    N +   LE +S +   DN    S+  + D
Sbjct: 113 LHLVRIVPHPGHSSSANNYDIALLELESEITFNDNLQPVSLPEQDD 158


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +1

Query: 232 KIFATEKRIKEERIDYNISWSPPDSADQESSLPCDSGQPW 351
           ++  T   +K++  DY + W P +    E  L   S Q W
Sbjct: 74  QVMTTNLWVKQKWFDYKLRWDPEEYGGVE-MLYVPSEQIW 112


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +1

Query: 220 NYEQKIFATEKRIKEERIDYNISWSPPD 303
           N + +I  T   +++   DY + W P +
Sbjct: 68  NLKNQIMTTNLWVEQSWYDYKLRWEPKE 95


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +1

Query: 220 NYEQKIFATEKRIKEERIDYNISWSPPD 303
           N + +I  T   +++   DY + W P +
Sbjct: 68  NLKNQIMTTNLWVEQSWYDYKLRWEPKE 95


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +1

Query: 220 NYEQKIFATEKRIKEERIDYNISWSPPD 303
           N + +I  T   +++   DY + W P +
Sbjct: 64  NLKNQIMTTNLWVEQTWYDYKLKWEPKE 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,536
Number of Sequences: 2352
Number of extensions: 7895
Number of successful extensions: 27
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)