Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_P04
(467 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40942-6|AAP68937.1| 709|Caenorhabditis elegans High temperatur... 30 0.72
U40942-5|AAC47068.1| 729|Caenorhabditis elegans High temperatur... 30 0.72
AY070228-1|AAL55425.1| 729|Caenorhabditis elegans HID-1 protein. 30 0.72
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 30 0.95
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 30 0.95
U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical p... 28 2.9
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 28 2.9
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z70781-1|CAA94835.1| 358|Caenorhabditis elegans Hypothetical pr... 27 8.9
U41034-7|AAN72427.1| 465|Caenorhabditis elegans Hypothetical pr... 27 8.9
>U40942-6|AAP68937.1| 709|Caenorhabditis elegans High
temperature-induced dauerformation protein 1, isoform b
protein.
Length = 709
Score = 30.3 bits (65), Expect = 0.72
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 260 KKNVLITTYLGLHQIQLIRNLHSLVTVGNH 349
K N+ + T+ G H LI +H L+T GN+
Sbjct: 411 KANINVQTFTGTHADLLILVIHKLITTGNY 440
>U40942-5|AAC47068.1| 729|Caenorhabditis elegans High
temperature-induced dauerformation protein 1, isoform a
protein.
Length = 729
Score = 30.3 bits (65), Expect = 0.72
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 260 KKNVLITTYLGLHQIQLIRNLHSLVTVGNH 349
K N+ + T+ G H LI +H L+T GN+
Sbjct: 411 KANINVQTFTGTHADLLILVIHKLITTGNY 440
>AY070228-1|AAL55425.1| 729|Caenorhabditis elegans HID-1 protein.
Length = 729
Score = 30.3 bits (65), Expect = 0.72
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 260 KKNVLITTYLGLHQIQLIRNLHSLVTVGNH 349
K N+ + T+ G H LI +H L+T GN+
Sbjct: 411 KANINVQTFTGTHADLLILVIHKLITTGNY 440
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 29.9 bits (64), Expect = 0.95
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 175 EPKEETSNEEDNDLGNY-EQKIFATEKRIKEERIDY 279
E K+ET++ ED+D GNY E FA+ + E D+
Sbjct: 393 EKKDETADPEDDDSGNYKESHQFASHMKDNEAVSDF 428
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 29.9 bits (64), Expect = 0.95
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 175 EPKEETSNEEDNDLGNY-EQKIFATEKRIKEERIDY 279
E K+ET++ ED+D GNY E FA+ + E D+
Sbjct: 393 EKKDETADPEDDDSGNYKESHQFASHMKDNEAVSDF 428
>U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical
protein C17G10.6b protein.
Length = 487
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 175 EPKEETSNEEDNDLGNYEQKIFATEKRIKEERID----YNISWSPPDSADQESSLPCDSG 342
E +EE N+ED+D GN E+ + +K+ K ++I+ + PP Q ++P D
Sbjct: 381 EDEEEDDNDEDDD-GNNEENGY--KKKQKRKKINCPPPQREHYQPPQPLPQNYNIPPDQ- 436
Query: 343 QPWP 354
P+P
Sbjct: 437 VPYP 440
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 175 EPKEETSNEEDNDLGNYEQKIFATEKRIKEERID----YNISWSPPDSADQESSLPCDSG 342
E +EE N+ED+D GN E+ + +K+ K ++I+ + PP Q ++P D
Sbjct: 432 EDEEEDDNDEDDD-GNNEENGY--KKKQKRKKINCPPPQREHYQPPQPLPQNYNIPPDQ- 487
Query: 343 QPWP 354
P+P
Sbjct: 488 VPYP 491
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 187 ETSNEEDNDLGNYEQKIFATEKRIKEER 270
E +E+D L N E ++ A EKR+ +++
Sbjct: 2083 EDESEDDGTLSNSESRLVAREKRLMDKK 2110
>Z70781-1|CAA94835.1| 358|Caenorhabditis elegans Hypothetical
protein F57A8.3 protein.
Length = 358
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 167 IITFIIWSVDIFYILHVTS 111
I+ F+IWS+ ++YI TS
Sbjct: 144 ILPFVIWSICVYYIFSPTS 162
>U41034-7|AAN72427.1| 465|Caenorhabditis elegans Hypothetical
protein M02D8.4b protein.
Length = 465
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 217 GNYEQKIFATEKRIKEERIDYNISWSP 297
GN+E K+F EK + + +D + S P
Sbjct: 330 GNWESKLFFLEKELMKSSVDISTSTMP 356
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,007,343
Number of Sequences: 27780
Number of extensions: 193796
Number of successful extensions: 634
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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