Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_O18
(308 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 25 0.16
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 25 0.16
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 1.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 1.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 1.5
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 1.9
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 3.4
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 3.4
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 4.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 5.9
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 20 7.8
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 20 7.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 20 7.8
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 20 7.8
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 20 7.8
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 20 7.8
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 20 7.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 20 7.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 7.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 20 7.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 7.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 20 7.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 7.8
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 25.4 bits (53), Expect = 0.16
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 103 FFNSISMSFSVLVMICMILRLGHFA 29
F N S+ + +ICM+L +GH++
Sbjct: 269 FLNMASVFMRIFNLICMMLLIGHWS 293
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 25.4 bits (53), Expect = 0.16
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 103 FFNSISMSFSVLVMICMILRLGHFA 29
F N S+ + +ICM+L +GH++
Sbjct: 237 FLNMASVFMRIFNLICMMLLIGHWS 261
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.6 bits (46), Expect = 1.1
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 41 KSKNHTNHNQNRKAH 85
+ NH NHN N+ H
Sbjct: 420 QDNNHYNHNHNQARH 434
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 1.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 8 RVIYGNLSEMAKSKNHTNH 64
R +GNL E+ S++ T+H
Sbjct: 1442 RTAHGNLDELQLSRHATSH 1460
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 1.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 8 RVIYGNLSEMAKSKNHTNH 64
R +GNL E+ S++ T+H
Sbjct: 1438 RTAHGNLDELQLSRHATSH 1456
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 1.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 54 IQIITKTEKLIEMELKNR 107
+Q+ K +LIEM LKN+
Sbjct: 61 VQLGLKLSQLIEMNLKNQ 78
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 3.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 74 RKAHRNGIKKPKK 112
++AHR GI PKK
Sbjct: 446 QRAHRLGIDTPKK 458
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.0 bits (42), Expect = 3.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 95 IKKPKKVRHESTLGMDPKFLRNQRF 169
+K+ KV+H +TLG + L + +
Sbjct: 443 VKQYVKVKHSATLGYISRVLEKEPY 467
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 20.6 bits (41), Expect = 4.5
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = -2
Query: 175 FTEPLVPQEFRIHAKCG 125
+ PL+ + +IH CG
Sbjct: 314 YITPLIQKHLKIHDTCG 330
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.2 bits (40), Expect = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 222 GKLREKPRLR 251
GKLR+ PRL+
Sbjct: 1289 GKLRQSPRLK 1298
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 19.8 bits (39), Expect = 7.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 42 SRRIIQIITKTEKLIEMELKNRRRSDTNPHL 134
SR I +I ++ ++ + SDTN HL
Sbjct: 84 SREIAKIFLNENEINQLITECSAISDTNVHL 114
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.8 bits (39), Expect = 7.8
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +2
Query: 44 SKNHTNHNQNRKAHRN 91
+ N+ N+N N+K + N
Sbjct: 100 NNNYNNNNYNKKLYYN 115
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.8 bits (39), Expect = 7.8
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +2
Query: 44 SKNHTNHNQNRKAHRN 91
+ N+ N+N N+K + N
Sbjct: 100 NNNYNNNNYNKKLYYN 115
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 7.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 50 NHTNHNQNRKAHRNGIKKPKKV 115
N+T HN N K + N KK+
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKL 108
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 7.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 50 NHTNHNQNRKAHRNGIKKPKKV 115
N+T HN N K + N KK+
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKL 108
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 7.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 50 NHTNHNQNRKAHRNGIKKPKKV 115
N+T HN N K + N KK+
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKL 108
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 7.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 50 NHTNHNQNRKAHRNGIKKPKKV 115
N+T HN N K + N KK+
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKL 108
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 7.8
Identities = 10/45 (22%), Positives = 19/45 (42%)
Frame = +2
Query: 44 SKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRNQRFCKK 178
+ +H + ++ RN + K R+E K L + CK+
Sbjct: 227 TSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKR 271
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 7.8
Identities = 10/45 (22%), Positives = 19/45 (42%)
Frame = +2
Query: 44 SKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRNQRFCKK 178
+ +H + ++ RN + K R+E K L + CK+
Sbjct: 227 TSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKR 271
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 7.8
Identities = 10/45 (22%), Positives = 19/45 (42%)
Frame = +2
Query: 44 SKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRNQRFCKK 178
+ +H + ++ RN + K R+E K L + CK+
Sbjct: 227 TSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKR 271
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 7.8
Identities = 10/45 (22%), Positives = 19/45 (42%)
Frame = +2
Query: 44 SKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRNQRFCKK 178
+ +H + ++ RN + K R+E K L + CK+
Sbjct: 227 TSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKR 271
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 19.8 bits (39), Expect = 7.8
Identities = 10/45 (22%), Positives = 19/45 (42%)
Frame = +2
Query: 44 SKNHTNHNQNRKAHRNGIKKPKKVRHESTLGMDPKFLRNQRFCKK 178
+ +H + ++ RN + K R+E K L + CK+
Sbjct: 216 TSSHYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKR 260
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 116 RHESTLGMDPKFL 154
RH STL +D K L
Sbjct: 241 RHSSTLDIDHKML 253
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,102
Number of Sequences: 438
Number of extensions: 1178
Number of successful extensions: 29
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6471036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -