Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_O16
(644 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 246 1e-65
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 246 1e-65
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 235 1e-62
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 235 1e-62
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 204 3e-53
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 110 7e-25
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 110 7e-25
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 110 7e-25
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 99 1e-21
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 99 3e-21
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 92 4e-19
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 84 9e-17
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 81 9e-16
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 81 9e-16
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 81 9e-16
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 80 1e-15
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 80 1e-15
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 79 3e-15
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 76 2e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 75 4e-14
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 71 9e-13
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 70 2e-12
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 70 2e-12
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 69 2e-12
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 69 2e-12
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 69 3e-12
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 69 3e-12
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 69 4e-12
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 67 1e-11
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 62 3e-10
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 62 3e-10
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 62 3e-10
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 61 6e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 61 6e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 61 6e-10
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 56 2e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 51 6e-07
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 51 6e-07
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 47 1e-05
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 43 2e-04
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.075
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 32 0.40
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical ... 31 0.53
Z78539-7|CAB01726.2| 560|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical pr... 29 3.7
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 29 3.7
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ... 28 4.9
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 246 bits (601), Expect = 1e-65
Identities = 113/163 (69%), Positives = 140/163 (85%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S IK+FVLDEADEMLSRGFKDQI++VF+ + DVQV+LLSATMP +VL+V+ FMR+
Sbjct: 167 LDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRN 226
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P+RILV+K+ELTLEGI+QFYI ++ +EWK + LCDLY+ +++ QAVIFCNTRRKVD LTE
Sbjct: 227 PIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTE 286
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
M E FTVS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LA
Sbjct: 287 KMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILA 329
Score = 64.5 bits (150), Expect = 6e-11
Identities = 31/47 (65%), Positives = 33/47 (70%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RGIDVQQVS VINYDLP+NRENYIH +AINFVTE D
Sbjct: 330 RGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTEND 376
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 246 bits (601), Expect = 1e-65
Identities = 113/163 (69%), Positives = 140/163 (85%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S IK+FVLDEADEMLSRGFKDQI++VF+ + DVQV+LLSATMP +VL+V+ FMR+
Sbjct: 167 LDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRN 226
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P+RILV+K+ELTLEGI+QFYI ++ +EWK + LCDLY+ +++ QAVIFCNTRRKVD LTE
Sbjct: 227 PIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTE 286
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
M E FTVS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LA
Sbjct: 287 KMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILA 329
Score = 64.5 bits (150), Expect = 6e-11
Identities = 31/47 (65%), Positives = 33/47 (70%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RGIDVQQVS VINYDLP+NRENYIH +AINFVTE D
Sbjct: 330 RGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTEND 376
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 235 bits (576), Expect = 1e-62
Identities = 102/165 (61%), Positives = 141/165 (85%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R LR IKL VLDEADEML++GFK+Q++D+++ L QV+LLSAT+P ++LE++ FM
Sbjct: 162 RNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFM 221
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
DP+RILV+++ELTLEGIKQF++A++ EEWK +TL DLYDTL+I QAV+FCNTRRKVDWL
Sbjct: 222 TDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWL 281
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
T+ M E +FTVS+MHGDM+Q++R+ +M++FR G++RVLI+TD+ A
Sbjct: 282 TDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWA 326
Score = 57.6 bits (133), Expect = 7e-09
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = +2
Query: 494 WLRGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
W RG+DV QVS VINYDLP NRE YIH +AINFV + D
Sbjct: 325 WARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDD 373
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 235 bits (576), Expect = 1e-62
Identities = 102/165 (61%), Positives = 141/165 (85%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R LR IKL VLDEADEML++GFK+Q++D+++ L QV+LLSAT+P ++LE++ FM
Sbjct: 162 RNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFM 221
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
DP+RILV+++ELTLEGIKQF++A++ EEWK +TL DLYDTL+I QAV+FCNTRRKVDWL
Sbjct: 222 TDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWL 281
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
T+ M E +FTVS+MHGDM+Q++R+ +M++FR G++RVLI+TD+ A
Sbjct: 282 TDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWA 326
Score = 57.6 bits (133), Expect = 7e-09
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = +2
Query: 494 WLRGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
W RG+DV QVS VINYDLP NRE YIH +AINFV + D
Sbjct: 325 WARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDD 373
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 204 bits (499), Expect = 3e-53
Identities = 95/160 (59%), Positives = 125/160 (78%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S IK+FVLDEADEMLS+GFKDQI++VF+ + DVQV+LLSATMP +VL+V+ FMRDP+R
Sbjct: 129 SRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRDPIR 188
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
ILV+K+ELTLEGI+QFYI ++ +EWK LCDL T QA+IFCNTRR+V LTE +
Sbjct: 189 ILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRETQALIFCNTRRRVTQLTEQLM 248
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
VS HG+M+ ERE +++ F + ++RVL+TTDL+A
Sbjct: 249 SIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMA 288
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RG+++++ S +INYD+ N ENY+ L I+F TE D
Sbjct: 289 RGMNIRK-SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTEND 334
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 110 bits (265), Expect = 7e-25
Identities = 60/164 (36%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
Frame = +1
Query: 19 STIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQVILLSATMPDDVLEVSRCFMR 186
S I+ VLDEAD M+ +GF D ++ M+ S VQ +L SAT + V+ + ++
Sbjct: 353 SKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIK 412
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
+ + +++++EE L IKQFY+ + K + +LY L++A +VIFC+T+ V WL
Sbjct: 413 NAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLY 472
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
E+M R V +HGDM ER + F+ G +VLITT++ A
Sbjct: 473 ENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFA 516
Score = 33.9 bits (74), Expect = 0.099
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLP 550
RGIDV QVS VINYDLP
Sbjct: 517 RGIDVAQVSVVINYDLP 533
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 110 bits (265), Expect = 7e-25
Identities = 60/164 (36%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
Frame = +1
Query: 19 STIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQVILLSATMPDDVLEVSRCFMR 186
S I+ VLDEAD M+ +GF D ++ M+ S VQ +L SAT + V+ + ++
Sbjct: 378 SKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIK 437
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
+ + +++++EE L IKQFY+ + K + +LY L++A +VIFC+T+ V WL
Sbjct: 438 NAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLY 497
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
E+M R V +HGDM ER + F+ G +VLITT++ A
Sbjct: 498 ENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFA 541
Score = 33.9 bits (74), Expect = 0.099
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLP 550
RGIDV QVS VINYDLP
Sbjct: 542 RGIDVAQVSVVINYDLP 558
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 110 bits (265), Expect = 7e-25
Identities = 60/164 (36%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
Frame = +1
Query: 19 STIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQVILLSATMPDDVLEVSRCFMR 186
S I+ VLDEAD M+ +GF D ++ M+ S VQ +L SAT + V+ + ++
Sbjct: 762 SKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIK 821
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
+ + +++++EE L IKQFY+ + K + +LY L++A +VIFC+T+ V WL
Sbjct: 822 NAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLY 881
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
E+M R V +HGDM ER + F+ G +VLITT++ A
Sbjct: 882 ENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFA 925
Score = 33.9 bits (74), Expect = 0.099
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLP 550
RGIDV QVS VINYDLP
Sbjct: 926 RGIDVAQVSVVINYDLP 942
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 99 bits (238), Expect = 1e-21
Identities = 56/156 (35%), Positives = 89/156 (57%)
Frame = +1
Query: 28 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 207
K VLDEAD++LS+ F+ + + L + QV+L SAT P+ V + M P I +
Sbjct: 187 KTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHMHKPYEINL 246
Query: 208 QKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERD 387
EELTL G+ Q+Y ++ E+ K+ L L+ L I Q++IFCN+ ++V+ L + + E
Sbjct: 247 M-EELTLLGVTQYYAFVQ-EKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIG 304
Query: 388 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 495
++ +H M Q R + FR G+ R L+ +DLL
Sbjct: 305 YSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLL 340
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEADR 643
RGID+Q V+ VIN+D P N E Y+H +AIN +T DR
Sbjct: 342 RGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDR 389
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 98.7 bits (235), Expect = 3e-21
Identities = 55/163 (33%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
L+ +K FVLDE D+M+ + + ++ KM QV++ SAT+P ++ V + FM+
Sbjct: 181 LKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQ 240
Query: 187 DPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
DP+ + V E +LTL G++Q Y+ ++ E K L +L D L Q VIF ++ + L
Sbjct: 241 DPMEVYVDDEAKLTLHGLQQHYVKLKEAE-KNRRLLNLLDALEFNQVVIFVKAVKRCEAL 299
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 492
+ + E++F A+H M Q ER + F+ R+L+ TDL
Sbjct: 300 HQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDL 342
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTE 634
RG+D+++V+ V NYD+P + ++Y+H LAI FV++
Sbjct: 345 RGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSD 389
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 91.9 bits (218), Expect = 4e-19
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ +K FVLDE D+M+ G D DV ++ QV++ SAT+P ++ V + FM+D
Sbjct: 180 LKLDKVKYFVLDECDKMI--GDADMRRDVQEIK----QVMMFSATLPKELRTVCKRFMQD 233
Query: 190 PVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
P+ + V E +LTL G++Q Y+ ++ E K L +L D L Q VIF ++ + L
Sbjct: 234 PMEVYVDDEAKLTLHGLQQHYVKLKEAE-KNRRLLNLLDALEFNQVVIFVKAVKRCEALH 292
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 492
+ + E++F A+H M Q ER + F+ R+L+ TDL
Sbjct: 293 QLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDL 334
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTE 634
RG+D+++V+ V NYD+P + ++Y+H LAI FV++
Sbjct: 337 RGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSD 381
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 86.6 bits (205), Expect = 1e-17
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD ML GF+ QI + + D Q ++ SAT P +V ++ F +D + V
Sbjct: 281 VLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSL 340
Query: 217 ELTLE-GIKQFYIAIE--LEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERD 387
EL I Q +E ++ KL L + + +IF T+RK D LT +M
Sbjct: 341 ELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDG 400
Query: 388 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+ +HGD +Q ER+ ++++F+ G + +++ TD+ A
Sbjct: 401 WPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAA 437
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RG+DV + VINYD P N E+Y+H A F T +
Sbjct: 438 RGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTN 484
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 83.8 bits (198), Expect = 9e-17
Identities = 43/165 (26%), Positives = 84/165 (50%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+G +K ++DEAD +L+ F+ ++ + K++ + + L SATM V ++ R +
Sbjct: 181 KGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASL 240
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
RDP R+ V T++ +KQ YI + ++K L L + + A++FC T +
Sbjct: 241 RDPARVSVSSRYKTVDNLKQHYIFVP-NKYKETYLVYLLNEHAGNSAIVFCATCATTMQI 299
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+ + +HG M Q +R + +F++ + +L+ TD+ A
Sbjct: 300 AVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAA 344
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RG+D+ V VINYD+P+ ++Y+H +AI VT+ D
Sbjct: 345 RGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYD 391
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 80.6 bits (190), Expect = 9e-16
Identities = 42/165 (25%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
LR S ++ V DEAD + GF+DQ+ + K + Q +L SAT+P +++ ++ + D
Sbjct: 163 LRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTD 222
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEE--WKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
P+ + + +E + + + +E + L LC D + Q V+FC T + V+++
Sbjct: 223 PMLVRLDVDEKVSDKLSMVFCMCRPDEKLFALLHLCRRMDREN-KQTVVFCATMKHVEYV 281
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+H S ++ +D R++ +++F + +L+ TD+ A
Sbjct: 282 VGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAA 326
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 80.6 bits (190), Expect = 9e-16
Identities = 42/165 (25%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
LR S ++ V DEAD + GF+DQ+ + K + Q +L SAT+P +++ ++ + D
Sbjct: 163 LRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTD 222
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEE--WKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
P+ + + +E + + + +E + L LC D + Q V+FC T + V+++
Sbjct: 223 PMLVRLDVDEKVSDKLSMVFCMCRPDEKLFALLHLCRRMDREN-KQTVVFCATMKHVEYV 281
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+H S ++ +D R++ +++F + +L+ TD+ A
Sbjct: 282 VGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAA 326
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 80.6 bits (190), Expect = 9e-16
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 4/165 (2%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
+ ++++ VLDEAD ML GF Q++ + L A+ Q +L SAT +V ++ R D
Sbjct: 218 MSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNVKDLCRVCTND 277
Query: 190 PVRILVQK--EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
PV + V + T + +KQ Y+ +E EE K+ L + ++++F ++ ++ +L
Sbjct: 278 PVFVSVHENASAATPDNLKQSYVIVE-EEHKINALWSFIEAHRKKKSLVFVSSCKQARFL 336
Query: 364 TESMHE--RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 492
TE+ + V + G M+Q++R +F + VLI TD+
Sbjct: 337 TEAFSQLRPGLPVMGLWGTMNQKKRIETFTKFDESKAAVLIATDV 381
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIH 574
RG+D + + VI D P ++YIH
Sbjct: 384 RGLDFEHIDWVIQVDCPAQIDDYIH 408
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 80.2 bits (189), Expect = 1e-15
Identities = 45/163 (27%), Positives = 85/163 (52%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
+ S + FVLDEAD+++ F+D I+ + L QV + SAT P ++ + F+RD
Sbjct: 160 MNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFLRD 219
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
+ +++ L GIKQ+ +A LE L + ++ QA++FC+ K + +
Sbjct: 220 AALVRFNADDVQLFGIKQYVVA--KCSPMLEKLTHVLKSIRYVQALVFCDQISKCEPIAT 277
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+ V+ + M Q++R++ + Q R ++L+++DL A
Sbjct: 278 HLKSSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTA 320
Score = 31.1 bits (67), Expect = 0.70
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIH 574
RGID V+ V+N D N E Y H
Sbjct: 321 RGIDADNVNLVVNIDAAANEETYFH 345
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 80.2 bits (189), Expect = 1e-15
Identities = 45/163 (27%), Positives = 85/163 (52%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
+ S + FVLDEAD+++ F+D I+ + L QV + SAT P ++ + F+RD
Sbjct: 160 MNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFLRD 219
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
+ +++ L GIKQ+ +A LE L + ++ QA++FC+ K + +
Sbjct: 220 AALVRFNADDVQLFGIKQYVVA--KCSPMLEKLTHVLKSIRYVQALVFCDQISKCEPIAT 277
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+ V+ + M Q++R++ + Q R ++L+++DL A
Sbjct: 278 HLKSSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTA 320
Score = 31.1 bits (67), Expect = 0.70
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIH 574
RGID V+ V+N D N E Y H
Sbjct: 321 RGIDADNVNLVVNIDAAANEETYFH 345
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 79.0 bits (186), Expect = 3e-15
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ VLDEAD M +GF+ QI V + D Q +L SAT P + ++R + PV IL
Sbjct: 455 VTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEIL 514
Query: 205 VQKEELTLEGIKQ-FYIAIELEEW-KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
V + + I Q I E +++ KL L +Y +++F + + K D + + +
Sbjct: 515 VGGKSVVCSDITQNAVICAEHQKFLKLLELLGMY--YEEGSSIVFVDKQEKADDIVDQLM 572
Query: 379 ERDF-TVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+ +V+ +HG +DQ +R+ + F+TG +VL+ T + A
Sbjct: 573 RTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAA 613
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFV 628
RG+DV+ + V+NYD P + E+Y+H A FV
Sbjct: 614 RGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFV 656
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 76.2 bits (179), Expect = 2e-14
Identities = 52/163 (31%), Positives = 90/163 (55%), Gaps = 6/163 (3%)
Frame = +1
Query: 28 KLFVLDEADEMLSRGFKDQIHDVF---KMLSADVQVI-LLSATMPDDVLEVSRCFMRDP- 192
+ VLDEAD ML GF+ QI + +M S + ++ + SAT P ++ +++ F+++
Sbjct: 327 RYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENY 386
Query: 193 VRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYD-TLSIAQAVIFCNTRRKVDWLTE 369
V + V + T E I Q + +E +E K L DL D T + ++F T+R L
Sbjct: 387 VFLAVGRVGSTSENIMQKIVWVEEDE-KRSYLMDLLDATGDSSLTLVFVETKRGASDLAY 445
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
++ +++ V +HGD+ Q ERE + FRTG++ +L+ T + A
Sbjct: 446 YLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAA 488
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEADR 643
RG+D+ V VINYDLP++ + Y+H LA +F + +R
Sbjct: 489 RGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNR 536
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 74.9 bits (176), Expect = 4e-14
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
V DEAD M GF+ Q+ + + D Q ++ SAT V ++R + DPVRI+ +
Sbjct: 418 VFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEV 477
Query: 217 ELTLEGIKQFYIAIELEEWKLETLC-DLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFT 393
I+Q ++ ++ KL L +L + S+ + +IF + + + + + +DF
Sbjct: 478 GEANADIEQKVFVMQNQDVKLHWLIRNLVEFASLGKVLIFVTKKLDSEDVAKKLKMKDFD 537
Query: 394 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+ +HGDM Q ER + +FR S++L+ TD+ A
Sbjct: 538 IVLLHGDMLQAERNENLLKFRK-KSQILVATDVAA 571
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RG+D+ ++ VIN+D+ + + ++H A VTE D
Sbjct: 572 RGLDISEIRTVINFDMARDIDTHVHRIGRTGRAGHKGTAYTLVTEKD 618
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 70.5 bits (165), Expect = 9e-13
Identities = 45/155 (29%), Positives = 74/155 (47%)
Frame = +1
Query: 28 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 207
+ VLDEAD ML GF+D+I +F A Q +L SATMP + ++ + P+ + V
Sbjct: 348 RYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNV 407
Query: 208 QKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERD 387
+ + Q + E KL + + S + +IF + VD + E + +
Sbjct: 408 GRAGAASLNVLQELEFVRSEN-KLVRVLECLQKTS-PKVLIFAEKKVDVDNIYEYLLVKG 465
Query: 388 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 492
V+++HG DQ +R + FR VL+ TD+
Sbjct: 466 VEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDV 500
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTE 634
+G+D Q + VIN+D+P + ENY+H LA F+ +
Sbjct: 503 KGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINK 547
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 69.7 bits (163), Expect = 2e-12
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 5/161 (3%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP--VR 198
I+ FVLDEAD ML + DQ+ +F+ +S Q +LLSAT+ +++ + R R P
Sbjct: 236 IQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVSTRKPYFFE 295
Query: 199 ILVQKEELTLEGIKQFYIA--IELEEWKLETLCDLYDTLSIAQAV-IFCNTRRKVDWLTE 369
+ +E T++ ++Q Y+ + +++ L + Y + +V IF T R+ L
Sbjct: 296 DKGKDDESTVDRLEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAY 355
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 492
F V ++H + Q++R + FR+ + +V+I TD+
Sbjct: 356 MFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDV 396
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RG+D+ V V+N+++P + YIH A++FVT+ D
Sbjct: 399 RGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYD 445
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 69.7 bits (163), Expect = 2e-12
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 5/161 (3%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP--VR 198
I+ FVLDEAD ML + DQ+ +F+ +S Q +LLSAT+ +++ + R R P
Sbjct: 236 IQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVSTRKPYFFE 295
Query: 199 ILVQKEELTLEGIKQFYIA--IELEEWKLETLCDLYDTLSIAQAV-IFCNTRRKVDWLTE 369
+ +E T++ ++Q Y+ + +++ L + Y + +V IF T R+ L
Sbjct: 296 DKGKDDESTVDRLEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAY 355
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 492
F V ++H + Q++R + FR+ + +V+I TD+
Sbjct: 356 MFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDV 396
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RG+D+ V V+N+++P + YIH A++FVT+ D
Sbjct: 399 RGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYD 445
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 69.3 bits (162), Expect = 2e-12
Identities = 57/176 (32%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 174
++ + FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 488 IKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
Query: 175 CFMRDP-VRILVQKEELTLEGIKQFYIAIELEEWK---LETL---CDLYDTLSIAQA--- 324
F+R+ V I + K + + Q + E E K LE L D Y T A+
Sbjct: 548 AFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTK 607
Query: 325 --VIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 486
++F + R D L + +HG +QRER +RQFR GS VLI T
Sbjct: 608 KTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIAT 663
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTE 634
RG+D++ V VINYD+P N ++YIH A +F++E
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE 712
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line helicase
protein 1 protein.
Length = 763
Score = 69.3 bits (162), Expect = 2e-12
Identities = 57/176 (32%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 174
++ + FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 488 IKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
Query: 175 CFMRDP-VRILVQKEELTLEGIKQFYIAIELEEWK---LETL---CDLYDTLSIAQA--- 324
F+R+ V I + K + + Q + E E K LE L D Y T A+
Sbjct: 548 AFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTK 607
Query: 325 --VIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 486
++F + R D L + +HG +QRER +RQFR GS VLI T
Sbjct: 608 KTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIAT 663
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTE 634
RG+D++ V VINYD+P N ++YIH A +F++E
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE 712
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 373 MHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
M E FTVS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LA
Sbjct: 1 MTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILA 42
Score = 64.5 bits (150), Expect = 6e-11
Identities = 31/47 (65%), Positives = 33/47 (70%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RGIDVQQVS VINYDLP+NRENYIH +AINFVTE D
Sbjct: 43 RGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTEND 89
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 68.9 bits (161), Expect = 3e-12
Identities = 57/176 (32%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 174
++ + FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 488 IKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
Query: 175 CFMRDP-VRILVQKEELTLEGIKQFYIAIELEEWK---LETL---CDLYDTLSIAQA--- 324
F+R+ V I + K + + Q + E E K LE L D Y T A+
Sbjct: 548 AFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTK 607
Query: 325 --VIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 486
++F + R D L + +HG +QRER +RQFR GS VLI T
Sbjct: 608 KTMVFVSQRAMADILASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIAT 663
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTE 634
RG+D++ V VINYD+P N ++YIH A +F++E
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE 712
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 68.5 bits (160), Expect = 4e-12
Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Frame = +1
Query: 28 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 207
++ VLDEAD ML F+DQ++++ ++ + + Q +L SATM +++ E++ ++ PV+I +
Sbjct: 320 QVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSLQKPVKIFI 379
Query: 208 QKEELTLEGIKQFYIAIEL-EEWKLETLCDLYDTLSI-AQAVIFCNTRRKVDWLTESMHE 381
+ T ++Q +I I E E + T + ++F T++ + +
Sbjct: 380 NENTDTALKLRQEFIRIRAGRETDREAMVAALVTRTFQTNTIVFVRTKKDCQRMQILLGL 439
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 492
V M + Q +R + +F+ VL++TDL
Sbjct: 440 LGIKVGQMQSSLTQGQRIESLSKFKKAEIDVLVSTDL 476
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEADR 643
RG+D++ V VIN ++P + + YIH +I+ V E +R
Sbjct: 479 RGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEDER 526
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 66.9 bits (156), Expect = 1e-11
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
+++ VLDEAD ML GF+ I + + D V L SAT P+ V +++ + ++ V
Sbjct: 235 ASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVM 294
Query: 199 ILVQKEELT-LEGIKQFYIAIELEEWKLETLCDLYDTLSIA-----QAVIFCNTRRKVDW 360
+ +LT + + QF+ + + + +C++ + L+ A + +IF ++ D
Sbjct: 295 AVNGSLDLTSCKSVTQFFEFVP-HDSRFLRVCEIVNFLTAAHGQNYKMIIFVKSKVMADH 353
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 492
L+ + +HG Q +RE+ + R+G ++L+ TDL
Sbjct: 354 LSSDFCMKGINSQGLHGGRSQSDREMSLNMLRSGEVQILVATDL 397
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEADR 643
RGIDV ++ V+NYD P + E Y+H A++F+ DR
Sbjct: 400 RGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLWWNDR 447
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 66.5 bits (155), Expect = 2e-11
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR-DPVRI 201
+K ++DEAD +L GF+ ++ V + L Q +L SAT V E+ + + +PVR+
Sbjct: 216 MKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVKLALHSNPVRV 275
Query: 202 LVQK--EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 375
V + EE T+EG++Q YI ++ +L L + ++F ++ V + E +
Sbjct: 276 SVHEKAEEATVEGLQQGYIVAPSDK-RLLLLFTFLKKNKTKKVMVFFSSCNSVKFHHELL 334
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+ D ++HG Q++R QF + +L+ TD+ A
Sbjct: 335 NYIDIPCMSIHGKQKQQKRTTTFFQFCQAETGILLCTDVAA 375
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 62.1 bits (144), Expect = 3e-10
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Frame = +1
Query: 28 KLFVLDEADEMLSRGFKDQIHDVFKM---LSADVQVILLSATMPDDVLEVSRCFMRDP-V 195
+ VLDEAD ML GF+ QI + + SAT P ++ +++ F++D +
Sbjct: 299 RYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYI 358
Query: 196 RILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 375
+ V + T E I+Q + + E + + L + S ++F T+R + L +
Sbjct: 359 FLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFL 418
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+ + ++HGD+ Q ERE + FR+G +L+ T + A
Sbjct: 419 NRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAA 459
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEADR 643
RG+D+ V VINYDLP + + Y+H +A +F + +R
Sbjct: 460 RGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNR 507
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 62.1 bits (144), Expect = 3e-10
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Frame = +1
Query: 28 KLFVLDEADEMLSRGFKDQIHDVFKM---LSADVQVILLSATMPDDVLEVSRCFMRDP-V 195
+ VLDEAD ML GF+ QI + + SAT P ++ +++ F++D +
Sbjct: 283 RYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYI 342
Query: 196 RILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 375
+ V + T E I+Q + + E + + L + S ++F T+R + L +
Sbjct: 343 FLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFL 402
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+ + ++HGD+ Q ERE + FR+G +L+ T + A
Sbjct: 403 NRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAA 443
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEADR 643
RG+D+ V VINYDLP + + Y+H +A +F + +R
Sbjct: 444 RGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNR 491
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 62.1 bits (144), Expect = 3e-10
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Frame = +1
Query: 28 KLFVLDEADEMLSRGFKDQIHDVFKM---LSADVQVILLSATMPDDVLEVSRCFMRDP-V 195
+ VLDEAD ML GF+ QI + + SAT P ++ +++ F++D +
Sbjct: 280 RYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYI 339
Query: 196 RILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 375
+ V + T E I+Q + + E + + L + S ++F T+R + L +
Sbjct: 340 FLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFL 399
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+ + ++HGD+ Q ERE + FR+G +L+ T + A
Sbjct: 400 NRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAA 440
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEADR 643
RG+D+ V VINYDLP + + Y+H +A +F + +R
Sbjct: 441 RGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNR 488
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 61.3 bits (142), Expect = 6e-10
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 174
++ + FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 699 IKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAAR 758
Query: 175 CFMRDP-VRILVQKEELTLEGIKQFYIAIELEEWK---LETL---CDLYDT-----LSIA 318
+++ + + + K + + Q + + E K LE L D Y T +
Sbjct: 759 NHLKEGYIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTK 818
Query: 319 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 486
+ ++F + R D L + +HG +QRER +RQFR GS VLI T
Sbjct: 819 KTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIAT 874
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTE 634
RG+D++ V VINYD+P N ++YIH A +F++E
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISE 923
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 61.3 bits (142), Expect = 6e-10
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 174
++ + FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 699 IKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAAR 758
Query: 175 CFMRDP-VRILVQKEELTLEGIKQFYIAIELEEWK---LETL---CDLYDT-----LSIA 318
+++ + + + K + + Q + + E K LE L D Y T +
Sbjct: 759 NHLKEGYIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTK 818
Query: 319 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 486
+ ++F + R D L + +HG +QRER +RQFR GS VLI T
Sbjct: 819 KTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIAT 874
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTE 634
RG+D++ V VINYD+P N ++YIH A +F++E
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISE 923
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 61.3 bits (142), Expect = 6e-10
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 174
++ + FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 699 IKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAAR 758
Query: 175 CFMRDP-VRILVQKEELTLEGIKQFYIAIELEEWK---LETL---CDLYDT-----LSIA 318
+++ + + + K + + Q + + E K LE L D Y T +
Sbjct: 759 NHLKEGYIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTK 818
Query: 319 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 486
+ ++F + R D L + +HG +QRER +RQFR GS VLI T
Sbjct: 819 KTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIAT 874
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTE 634
RG+D++ V VINYD+P N ++YIH A +F++E
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISE 923
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV-RI 201
+ V+DEAD +LS G+++++ + L Q ++ SAT+ DD+ + + FM PV I
Sbjct: 171 VSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTLKKLFMTGPVITI 230
Query: 202 LVQKEEL-TLEGIKQFYIAIELEEWKLETLCDLYD-TLSIAQAVIFCNTRRKVDWLTESM 375
+ + +L + + Q+ + +E + L ++ L + ++++F NT + L +
Sbjct: 231 KLTEGDLPNSDQLTQYQLTCGSDEERFAILVAMFKLKLIVGRSILFVNTIDRCYKLMLIL 290
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 492
++ M R ++ QF GS +++I +D+
Sbjct: 291 RVFGLKSCILNSAMPANSRCHVINQFNEGSYQIVIASDV 329
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEADR 643
RGID VS V+N+D P + YIH A++F ++R
Sbjct: 370 RGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSER 417
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV-RI 201
+ V+DEAD +LS G+++++ + L Q ++ SAT+ DD+ + + FM PV I
Sbjct: 238 VSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTLKKLFMTGPVITI 297
Query: 202 LVQKEEL-TLEGIKQFYIAIELEEWKLETLCDLYD-TLSIAQAVIFCNTRRKVDWLTESM 375
+ + +L + + Q+ + +E + L ++ L + ++++F NT + L +
Sbjct: 298 KLTEGDLPNSDQLTQYQLTCGSDEERFAILVAMFKLKLIVGRSILFVNTIDRCYKLMLIL 357
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 492
++ M R ++ QF GS +++I +D+
Sbjct: 358 RVFGLKSCILNSAMPANSRCHVINQFNEGSYQIVIASDV 396
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEADR 643
RGID VS V+N+D P + YIH A++F ++R
Sbjct: 437 RGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSER 484
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/124 (22%), Positives = 64/124 (51%)
Frame = +1
Query: 121 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLY 300
Q ++ +ATM + ++R ++R P + + E ++Q + E+ K + L ++
Sbjct: 510 QTVMFTATMSSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVP-EDRKRKKLVEVL 568
Query: 301 DTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLI 480
++ +IF N ++ D L++ + + F + +HG Q +RE ++ + G+S +L+
Sbjct: 569 ESQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILV 628
Query: 481 TTDL 492
TD+
Sbjct: 629 ATDV 632
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RGIDV+ VS V+NYD+ + E+Y H AI F+T D
Sbjct: 635 RGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDD 681
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 51.2 bits (117), Expect = 6e-07
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEML-SRGFKDQIHDVFK---MLSADV-QVILLSATMPDDVLEVSR 174
++ + VLDEAD M+ S GF +I + M D Q ++ SAT P V E +R
Sbjct: 445 IKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAAR 504
Query: 175 CFMR-DPVRILVQKEELTLEG-IKQFYIAIELEEW-KLETLC----DLYDT-----LSIA 318
+R D I + K + I++F + + KL L D Y T + +
Sbjct: 505 KLLREDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGIDIDTYTTEKNSDVFVK 564
Query: 319 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 486
+ ++F ++ D L M +HG +Q+ER ++ FR+G+ VLI T
Sbjct: 565 KTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIAT 620
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RG+D++ V VINYD+P N ++YIH A +F++ AD
Sbjct: 625 RGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLAD 671
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 51.2 bits (117), Expect = 6e-07
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEML-SRGFKDQIHDVFK---MLSADV-QVILLSATMPDDVLEVSR 174
++ + VLDEAD M+ S GF +I + M D Q ++ SAT P V E +R
Sbjct: 445 IKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAAR 504
Query: 175 CFMR-DPVRILVQKEELTLEG-IKQFYIAIELEEW-KLETLC----DLYDT-----LSIA 318
+R D I + K + I++F + + KL L D Y T + +
Sbjct: 505 KLLREDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGIDIDTYTTEKNSDVFVK 564
Query: 319 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 486
+ ++F ++ D L M +HG +Q+ER ++ FR+G+ VLI T
Sbjct: 565 KTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIAT 620
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RG+D++ V VINYD+P N ++YIH A +F++ AD
Sbjct: 625 RGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLAD 671
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +1
Query: 307 LSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 486
L + +A++FC T+++ D + + + + + + +HGD ER+ + F+ G R L+ +
Sbjct: 503 LQMDKAIVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCS 562
Query: 487 DLLA 498
D++A
Sbjct: 563 DVVA 566
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTE 634
RG+DVQ V VI+ LP + Y+H L+I+ V+E
Sbjct: 567 RGLDVQGVPFVISVTLPDEKSMYVHRIGRVGRAERMGLSISLVSE 611
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
L+ +K FVLDE D+M+ + + ++ KM QV++ SAT+P ++ V + FM+
Sbjct: 181 LKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQ 240
Query: 187 DPVRILVQKE 216
D VR + E
Sbjct: 241 D-VRFISDPE 249
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 44.0 bits (99), Expect = 9e-05
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDV--------FKMLSADVQVILLSATMPDDVLEVSRCF 180
++ V DEAD +L KD + + F +A Q I+ SAT V+ V+
Sbjct: 534 LRFLVFDEADRLLQDMKKDPLGHLGAIIKDAGFMESAATRQTIMTSATFNASVMTVANEL 593
Query: 181 MR------DPVRILVQKEELTLEGIKQFYIAIELEEW--KLETLCDLYDTLSIAQAVIFC 336
M+ + ++I++ L+ +F+ L E KL + + +IF
Sbjct: 594 MKRLPGQDEMIKIVLANGRLSKRVNLEFFECKGLAEKNAKLREILKQNVNGKTLKTIIFV 653
Query: 337 NTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
+ + D + +HGD Q RE ++ F++ +L+TTDLL+
Sbjct: 654 QKKDQCDACAAKLTSGGMLAQTLHGDRSQDMREKLINDFKSNRVNLLVTTDLLS 707
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEAD 640
RG+D+ V VINYDLPT+ +YIH A+ + T+AD
Sbjct: 437 RGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFTDAD 483
Score = 41.5 bits (93), Expect = 5e-04
Identities = 37/168 (22%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Frame = +1
Query: 19 STIKLFVLDEADEMLS------RGFKDQIHDVFKMLSAD-VQVILLSATMPDDVLEVSRC 177
S+++ V+DE+D + + F++Q+ ++K A +V SAT +V + +
Sbjct: 268 SSLRWLVVDESDRLFEVVEGQDKCFRNQLAAIYKACDAKCTRVAFFSATFSHEVEKWCKE 327
Query: 178 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
+ + + V + + +KQ E+ K + +L T A++F ++ +
Sbjct: 328 NIDEIGMVCVGERNSSNTSVKQKLTYCGTEDGKKIAIRNLLRTSFKPPALVFVQSKDRAV 387
Query: 358 WLTE--SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 495
L + S + + V +++ +ER+ M +FR G VL+ T+LL
Sbjct: 388 QLVKLLSAIDSNLKVDSINSGKSDKERDETMERFRRGEIWVLVCTELL 435
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 42.7 bits (96), Expect = 2e-04
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
Frame = +1
Query: 1 ARGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATM--PDDVLEVSR 174
AR +R T++L V+DEAD F+D + ++ + + L SAT +D L V
Sbjct: 154 ARKMR--TLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSATQVKEEDDLMVFG 211
Query: 175 CFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIF---CNTR 345
V++ ++ +K +Y+ +E K + + + +IF CN+
Sbjct: 212 LRNAKQVKVAQERNSAAPSTLKNYYVECRADE-KTSVCLEFIRQRTDKKILIFFPSCNSV 270
Query: 346 RKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 498
R + E + + A+HG R ++ F ++ V+I+TD++A
Sbjct: 271 RYFYKIFERCLGKR-PLFAVHGKCSNPHRASQIKAFSDSTNGVMISTDVMA 320
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIH 574
RGID+ + VI +DLP + ++H
Sbjct: 321 RGIDISDIDWVIQFDLPKHSSWFVH 345
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.075
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIH 574
RG D+ +V CVINY+LP + + ++H
Sbjct: 461 RGTDLNKVDCVINYNLPADDKLFVH 485
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEADR 643
RG+D+Q + VI+Y +P E YIH L + V R
Sbjct: 335 RGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGLTVVLVDPPSR 382
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 500 RGIDVQQVSCVINYDLPTNRENYIHXXXXXXXXXXXXLAINFVTEADR 643
RG+D+Q + VI+Y +P E YIH L + V R
Sbjct: 502 RGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGLTVVLVDPPSR 549
>AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical
protein T08B1.6 protein.
Length = 653
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +1
Query: 223 TLEGIKQFYIA-IEL-EEWKLETLCDLYDTLSIAQAVIFC-NTRRKVDWLTESMHER 384
T+ GI F + + L + KLETLCD+ D + +IFC N +R +L+ + +R
Sbjct: 115 TMHGISGFDLTTVPLYHQSKLETLCDIIDNCKL--EIIFCENAKRAEGFLSSKLGDR 169
>Z78539-7|CAB01726.2| 560|Caenorhabditis elegans Hypothetical
protein C31E10.5 protein.
Length = 560
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +1
Query: 292 DLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSR 471
D D +A F TR++ ++ + + FTV + D DQ + M++ T S+R
Sbjct: 262 DSLDKRITREARAFYRTRKEHLYIEDQL----FTVYSRSEDFDQSLVDCTMQELETTSAR 317
Query: 472 VLITTDLLAPRYRRAASL 525
V I T +++ Y R +
Sbjct: 318 VQIFTRMISDDYNRTMGI 335
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 71 DSKIKSMMFSRCCLLMFRLFYFLLQCLMMY 160
D K +M+ RCCL+ F +F + C +M+
Sbjct: 498 DWKFAAMVVDRCCLITFSVFIVVSTCGIMF 527
>Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical
protein B0272.2 protein.
Length = 213
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 343 RRKVDWLTESMHERDFTVSAMHGDMDQREREVIMR 447
R +VD L +H D VSA+H M QR R R
Sbjct: 68 RMRVDQLRADVHRVDMAVSAVHTRMTQRWRAATER 102
>Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical
protein T09E11.10 protein.
Length = 338
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 337 NTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQ 450
N RK W+T+ + V + GD+DQ+ +E++M +
Sbjct: 96 NVLRKT-WMTQRNRIKSIFVIGLGGDVDQKTKELVMSE 132
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAPRYR 510
WL+ES+H D ++ ++ G R +I + + +R L+T + A +++
Sbjct: 1722 WLSESLHSADVSLESLLGVCTACNRALIRERDKQCITRALVTELMQAIKFK 1772
>Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAPRYR 510
WL+ES+H D ++ ++ G R +I + + +R L+T + A +++
Sbjct: 503 WLSESLHSADVSLESLLGVCTACNRALIRERDKQCITRALVTELMQAIKFK 553
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAPRYR 510
WL+ES+H D ++ ++ G R +I + + +R L+T + A +++
Sbjct: 1722 WLSESLHSADVSLESLLGVCTACNRALIRERDKQCITRALVTELMQAIKFK 1772
>Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAPRYR 510
WL+ES+H D ++ ++ G R +I + + +R L+T + A +++
Sbjct: 503 WLSESLHSADVSLESLLGVCTACNRALIRERDKQCITRALVTELMQAIKFK 553
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAPRYR 510
WL+ES+H D ++ ++ G R +I + + +R L+T + A +++
Sbjct: 1717 WLSESLHSADVSLESLLGVCTACNRALIRERDKQCITRALVTELMQAIKFK 1767
>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
protein C42C1.4a protein.
Length = 1259
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 147 HCSRK*NNLNISRQHLENIMDLIFE 73
HC R L +RQHLE DL+FE
Sbjct: 1009 HCVRTVIRLLEARQHLERAFDLLFE 1033
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,737,225
Number of Sequences: 27780
Number of extensions: 306982
Number of successful extensions: 938
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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