Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_O10
         (472 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   2.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   2.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   3.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.8  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   8.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   8.8  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 177 DI*SFSNWLMILSRVQNNQQPWFAE 103
           +I  F +++  L+   N + PWF+E
Sbjct: 259 NIPGFDDYMASLTPDTNRRNPWFSE 283


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 177 DI*SFSNWLMILSRVQNNQQPWFAE 103
           +I  F +++  L+   N + PWF+E
Sbjct: 349 NIPGFDDYMASLTPDTNRRNPWFSE 373


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/30 (20%), Positives = 16/30 (53%)
 Frame = +1

Query: 127 VLDPAQDHQPITEASYVNIPVIALCNTDSP 216
           ++DP ++++   E   + IP++   +   P
Sbjct: 167 IVDPVEENETYDEFDTIRIPIVRSLSKSPP 196


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 410 RNRLSSLPKWKRRRQFMRNGL 472
           RNR SSLP +K +   + N L
Sbjct: 312 RNRFSSLPYYKYKYLNVINAL 332


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 410 RNRLSSLPKWKRRRQFMRNGL 472
           RNR SSLP +K +   + N L
Sbjct: 312 RNRFSSLPYYKYKYLNVINAL 332


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +2

Query: 332 TSVGMLSLTCSSIVTLKRVRRKSNKLRNRLSSLPKWKRRR 451
           T++G+L+     I +L+   RK    + +LS   ++ RRR
Sbjct: 85  TTLGLLTKAKRFIKSLEERERKHAVHKEQLSREQRFLRRR 124


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 313 RGVLSRDQRWDVVVD 357
           RG++   +RW  V+D
Sbjct: 320 RGIMMLPERWQKVID 334


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,175
Number of Sequences: 438
Number of extensions: 2050
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)