Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_O08
         (606 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456934-1|CAG33215.1|  125|Homo sapiens PDCD5 protein.                73   8e-13
BT006694-1|AAP35340.1|  125|Homo sapiens programmed cell death 5...    73   1e-12
BC015519-1|AAH15519.1|  125|Homo sapiens programmed cell death 5...    73   1e-12
AF014955-1|AAD11579.1|  125|Homo sapiens TFAR19 protein.               73   1e-12
AB209040-1|BAD92277.1|   90|Homo sapiens programmed cell death 5...    32   1.8  
EF560734-1|ABQ59044.1|  588|Homo sapiens ATG16L1 protein protein.      29   9.6  
EF079889-1|ABN48554.1|  588|Homo sapiens ATG16 autophagy related...    29   9.6  
AY398617-1|AAR32130.1|  607|Homo sapiens APG16L beta protein.          29   9.6  
AY358182-1|AAQ88549.1|  470|Homo sapiens SSGL9393 protein.             29   9.6  
AK024453-1|BAB15743.1|  272|Homo sapiens FLJ00045 protein protein.     29   9.6  
AK000897-1|BAA91413.1|  309|Homo sapiens protein ( Homo sapiens ...    29   9.6  

>CR456934-1|CAG33215.1|  125|Homo sapiens PDCD5 protein.
          Length = 125

 Score = 72.9 bits (171), Expect = 8e-13
 Identities = 36/72 (50%), Positives = 53/72 (73%)
 Frame = +2

Query: 245 HSILSQALSQDARARLNTIKLSRPEKGAMVENMICRMAQMGQVQNRITEQELIQLLESVN 424
           +SIL+Q L Q ARARL+ + L +PEK   VEN + +MA+ GQ+  +++EQ LI++L+ V+
Sbjct: 41  NSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVS 100

Query: 425 QQMPKSTSTVKF 460
           QQ  K T+TVKF
Sbjct: 101 QQ-TKKTTTVKF 111


>BT006694-1|AAP35340.1|  125|Homo sapiens programmed cell death 5
           protein.
          Length = 125

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 36/72 (50%), Positives = 53/72 (73%)
 Frame = +2

Query: 245 HSILSQALSQDARARLNTIKLSRPEKGAMVENMICRMAQMGQVQNRITEQELIQLLESVN 424
           +SIL+Q L Q ARARL+ + L +PEK   VEN + +MA+ GQ+  +++EQ LI++L+ V+
Sbjct: 41  NSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVS 100

Query: 425 QQMPKSTSTVKF 460
           QQ  K T+TVKF
Sbjct: 101 QQTEK-TTTVKF 111


>BC015519-1|AAH15519.1|  125|Homo sapiens programmed cell death 5
           protein.
          Length = 125

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 36/72 (50%), Positives = 53/72 (73%)
 Frame = +2

Query: 245 HSILSQALSQDARARLNTIKLSRPEKGAMVENMICRMAQMGQVQNRITEQELIQLLESVN 424
           +SIL+Q L Q ARARL+ + L +PEK   VEN + +MA+ GQ+  +++EQ LI++L+ V+
Sbjct: 41  NSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVS 100

Query: 425 QQMPKSTSTVKF 460
           QQ  K T+TVKF
Sbjct: 101 QQTEK-TTTVKF 111


>AF014955-1|AAD11579.1|  125|Homo sapiens TFAR19 protein.
          Length = 125

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 36/72 (50%), Positives = 53/72 (73%)
 Frame = +2

Query: 245 HSILSQALSQDARARLNTIKLSRPEKGAMVENMICRMAQMGQVQNRITEQELIQLLESVN 424
           +SIL+Q L Q ARARL+ + L +PEK   VEN + +MA+ GQ+  +++EQ LI++L+ V+
Sbjct: 41  NSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVS 100

Query: 425 QQMPKSTSTVKF 460
           QQ  K T+TVKF
Sbjct: 101 QQTEK-TTTVKF 111


>AB209040-1|BAD92277.1|   90|Homo sapiens programmed cell death 5
           variant protein.
          Length = 90

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +2

Query: 245 HSILSQALSQDARARLNTIKLSRPEKGAMVENMICRMAQMGQVQNRITEQELIQL 409
           H IL   L       ++ + L +PEK   VEN + +MA+ GQ+  +++   L +L
Sbjct: 2   HLILMDFLHMYFFFLVSNLALVKPEKTKAVENYLIQMARYGQLSEKVSLDSLEEL 56


>EF560734-1|ABQ59044.1|  588|Homo sapiens ATG16L1 protein protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = +2

Query: 245 HSILSQALSQDARARLNTIKLSRPEKGAMVENMICRMAQMG-QVQNRITE-----QELIQ 406
           HS+L+Q L  +     N  ++S    G   +N +  MAQ+  + Q  +TE      EL Q
Sbjct: 49  HSVLAQKLQAEKHDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQ 108

Query: 407 LLESVNQQMPK 439
           L+  +N QM +
Sbjct: 109 LVIDLNNQMQR 119


>EF079889-1|ABN48554.1|  588|Homo sapiens ATG16 autophagy related
           16-like protein 1 protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = +2

Query: 245 HSILSQALSQDARARLNTIKLSRPEKGAMVENMICRMAQMG-QVQNRITE-----QELIQ 406
           HS+L+Q L  +     N  ++S    G   +N +  MAQ+  + Q  +TE      EL Q
Sbjct: 49  HSVLAQKLQAEKHDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQ 108

Query: 407 LLESVNQQMPK 439
           L+  +N QM +
Sbjct: 109 LVIDLNNQMQR 119


>AY398617-1|AAR32130.1|  607|Homo sapiens APG16L beta protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = +2

Query: 245 HSILSQALSQDARARLNTIKLSRPEKGAMVENMICRMAQMG-QVQNRITE-----QELIQ 406
           HS+L+Q L  +     N  ++S    G   +N +  MAQ+  + Q  +TE      EL Q
Sbjct: 49  HSVLAQKLQAEKHDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQ 108

Query: 407 LLESVNQQMPK 439
           L+  +N QM +
Sbjct: 109 LVIDLNNQMQR 119


>AY358182-1|AAQ88549.1|  470|Homo sapiens SSGL9393 protein.
          Length = 470

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = +2

Query: 245 HSILSQALSQDARARLNTIKLSRPEKGAMVENMICRMAQMG-QVQNRITE-----QELIQ 406
           HS+L+Q L  +     N  ++S    G   +N +  MAQ+  + Q  +TE      EL Q
Sbjct: 49  HSVLAQKLQAEKHDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQ 108

Query: 407 LLESVNQQMPK 439
           L+  +N QM +
Sbjct: 109 LVIDLNNQMQR 119


>AK024453-1|BAB15743.1|  272|Homo sapiens FLJ00045 protein protein.
          Length = 272

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = +2

Query: 245 HSILSQALSQDARARLNTIKLSRPEKGAMVENMICRMAQMG-QVQNRITE-----QELIQ 406
           HS+L+Q L  +     N  ++S    G   +N +  MAQ+  + Q  +TE      EL Q
Sbjct: 56  HSVLAQKLQAEKHDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQ 115

Query: 407 LLESVNQQMPK 439
           L+  +N QM +
Sbjct: 116 LVIDLNNQMQR 126


>AK000897-1|BAA91413.1|  309|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10035 fis, clone HEMBA1000919. ).
          Length = 309

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = +2

Query: 245 HSILSQALSQDARARLNTIKLSRPEKGAMVENMICRMAQMG-QVQNRITE-----QELIQ 406
           HS+L+Q L  +     N  ++S    G   +N +  MAQ+  + Q  +TE      EL Q
Sbjct: 49  HSVLAQKLQAEKHDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQ 108

Query: 407 LLESVNQQMPK 439
           L+  +N QM +
Sbjct: 109 LVIDLNNQMQR 119


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,407,470
Number of Sequences: 237096
Number of extensions: 1232738
Number of successful extensions: 1980
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)